RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LRRC26Q2I0M4 334 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 CABP7Q86V35 215 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 JAMLQ86YT9 394 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 CEP120Q8N960 986 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 SPATA20Q8TB22 786 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 ERCC4Q92889 916 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 CALML4Q96GE6 196 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 KCNMB3Q9NPA1 279 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 GPN3Q9UHW5 284 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 PCDHA5Q9Y5H7 936 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 A0A096LPE4 126 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 A0A1W2PPZ6 126 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 TTC24A2A3L6 582 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 GOLGA6L19H0YKK7 550 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 ALADP13716 330 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 HOXA13P31271 388 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 SARSP49591 514 aaKnown RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 COG2Q14746 738 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 SHHQ15465 462 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 SAMD5Q5TGI4 173 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 RRAGBQ5VZM2 374 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 CATSPERGQ6ZRH7 1159 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 C11orf57Q6ZUT1 292 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 PAGE5Q96GU1 130 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 GSDMAQ96QA5 445 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 PPP1R9BQ96SB3 815 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 ZNF576Q9H609 170 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 TTC12Q9H892 705 aaPredicted RBP9.73□□□□□ -0.85
TPM3-213ENST00000368545 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
TPM3-213ENST00000368545 BECN2A8MW95 431 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 DNM1LO00429 736 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 CILPO75339 1184 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 CDKN1CP49918 316 aaPredicted RBP9.72□□□□□ -0.85
TPM3-213ENST00000368545 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
TPM3-213ENST00000368545 DPCR1Q3MIW9 517 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 RUFY4Q6ZNE9 571 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
TPM3-213ENST00000368545 LUZP1Q86V48 1076 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 ARRDC4Q8NCT1 418 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 HAS1Q92839 578 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
TPM3-213ENST00000368545 MTIF3Q9H2K0 278 aaKnown RBP9.72□□□□□ -0.85
TPM3-213ENST00000368545 PCDHA12Q9UN75 941 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 ADAMTS5Q9UNA0 930 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
TPM3-213ENST00000368545 A0A0G2JLL6 359 aaPredicted RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 ALAS1P13196 640 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 SMPD1P17405 629 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 SETQ01105 290 aaPredicted RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 IQCB1Q15051 598 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 KRT79Q5XKE5 535 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 PRRT2Q7Z6L0 340 aaPredicted RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 CPXCR1Q8N123 301 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 CLEC4DQ8WXI8 215 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 TIFAQ96CG3 184 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 ATG4CQ96DT6 458 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 PDLIM2Q96JY6 352 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 RAVER2Q9HCJ3 691 aaKnown RBP9.71□□□□□ -0.85
TPM3-213ENST00000368545 HOMER2Q9NSB8 354 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 HOXC10Q9NYD6 342 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 STK17AQ9UEE5 414 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 CEP290O15078 2479 aa9.71□□□□□ -0.85
TPM3-213ENST00000368545 PP2D1A8MPX8 630 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 SMTNL1A8MU46 457 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 BIN1O00499 593 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 POU3F3P20264 500 aaPredicted RBP9.71□□□□□ -0.86
TPM3-213ENST00000368545 CDC25AP30304 524 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 AFMP43652 599 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 TPM4P67936 248 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 MORC3Q14149 939 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 SNX17Q15036 470 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 PRR16Q569H4 304 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 HAUS3Q68CZ6 603 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 C6orf15Q6UXA7 325 aaPredicted RBP9.71□□□□□ -0.86
TPM3-213ENST00000368545 EXOC8Q8IYI6 725 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 MB21D1Q8N884 522 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 RBBP8NLQ8NC74 664 aaPredicted RBP9.71□□□□□ -0.86
TPM3-213ENST00000368545 REPS2Q8NFH8 660 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 ETNPPLQ8TBG4 499 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 SMCR8Q8TEV9 937 aaPredicted RBP9.71□□□□□ -0.86
TPM3-213ENST00000368545 HPS1Q92902 700 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 RMND1Q9NWS8 449 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 MAN1B1Q9UKM7 699 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 FRMPD4Q14CM0 1322 aa9.71□□□□□ -0.86
TPM3-213ENST00000368545 LOXHD1Q8IVV2 1947 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 NFIBO00712 420 aa9.7□□□□□ -0.86
TPM3-213ENST00000368545 IKBKBO14920 756 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms