RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 PRELPP51888 382 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 GRIN1Q05586 938 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 GOLGA8FQ08AF8 430 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 GOLGA8DPQ0D2H9 430 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 EFTUD2Q15029 972 aaKnown RBP eCLIP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PATL1Q86TB9 770 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 THEM5Q8N1Q8 247 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 TTLL11Q8NHH1 800 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DCPSQ96C86 337 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 CATSPER2Q96P56 530 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ELAC2Q9BQ52 826 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ECT2Q9H8V3 914 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ADAM22Q9P0K1 906 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 UVRAGQ9P2Y5 699 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PPARGC1AQ9UBK2 798 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 NCKAP5LQ9HCH0 1330 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SYCE1LA8MT33 242 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 M0R2C6 588 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 MYO1DO94832 1006 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 UGP2Q16851 508 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ADCK5Q3MIX3 580 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ANKRD13CQ8N6S4 541 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 TERB1Q8NA31 727 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 FAM149B1Q96BN6 582 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 CALN1Q9BXU9 219 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 CAPN11Q9UMQ6 739 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 HEG1Q9ULI3 1381 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PHKA1P46020 1223 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 TCP10Q12799 353 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 KIAA1755Q5JYT7 1200 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 LRRC31Q6UY01 552 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 ZNF473Q8WTR7 871 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PGBD1Q96JS3 809 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DNAJC12Q9UKB3 198 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SNX2O60749 519 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DAB1O75553 588 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SYF2O95926 243 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 BAG6P46379 1132 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 GYG1P46976 350 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 NLRP11P59045 1033 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 TBL3Q12788 808 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 C1orf146Q5VVC0 180 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DAB2IPQ5VWQ8 1189 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 DNAJC9Q8WXX5 260 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SEPT8Q92599 483 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SMYD2Q9NRG4 433 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 CNOT8Q9UFF9 292 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 JAG2Q9Y219 1238 aa9.45□□□□□ -0.9
SYNE1-209ENST00000367257 TMA7Q9Y2S6 64 aaKnown RBP9.45□□□□□ -0.9
SYNE1-209ENST00000367257 PITPNM2Q9BZ72 1349 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 USP11P51784 963 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 CAPN12Q6ZSI9 719 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 DTX3LQ8TDB6 740 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 KCNK16Q96T55 309 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 MSTO1Q9BUK6 570 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 LIMA1Q9UHB6 759 aaKnown RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 TRPC5Q9UL62 973 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 PALMO75781 387 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 SOX5P35711 763 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 CASP2P42575 452 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 PDIA5Q14554 519 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 LRRC24Q50LG9 513 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 KCNV1Q6PIU1 500 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 TNIP2Q8NFZ5 429 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 UHMK1Q8TAS1 419 aaKnown RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 POLE3Q9NRF9 147 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 BFARQ9NZS9 450 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 hCG_1642624A0A1W2PR95 340 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 RSPH10B2B2RC85 870 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 NR3C1P04150 777 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 RSPH10BP0C881 870 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 PHKA2P46019 1235 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 YWHAHQ04917 246 aaPredicted RBP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 SIX5Q8N196 739 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYNE1-209ENST00000367257 PI4K2BQ8TCG2 481 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 SH3GL1Q99961 368 aa9.44□□□□□ -0.9
SYNE1-209ENST00000367257 BEGAINQ9BUH8 593 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms