RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
PRKN-202ENST00000366892 SNX29Q8TEQ0 813 aa18.7■□□□□ 0.58
PRKN-202ENST00000366892 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
PRKN-202ENST00000366892 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
PRKN-202ENST00000366892 IPPQ9Y573 584 aa18.7■□□□□ 0.58
PRKN-202ENST00000366892 CNTNAP2Q9UHC6 1331 aa18.7■□□□□ 0.58
PRKN-202ENST00000366892 A0A1B0GUA9 196 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 HIDE1A8MVS5 230 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 B4GALT5O43286 388 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 GLP2RO95838 553 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 GALTP07902 379 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 ITGA4P13612 1032 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 NDUFV1P49821 464 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 DUSP6Q16828 381 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 TMEM173Q86WV6 379 aaPredicted RBP18.69■□□□□ 0.58
PRKN-202ENST00000366892 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 MSLNLQ96KJ4 702 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 POLD4Q9HCU8 107 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 UBN1Q9NPG3 1134 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 ENTPD7Q9NQZ7 604 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 DNAJB4Q9UDY4 337 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 FAM50BQ9Y247 325 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 B4GALT3O60512 393 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 DDHD2O94830 711 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
PRKN-202ENST00000366892 CDCA2Q69YH5 1023 aaPredicted RBP18.69■□□□□ 0.58
PRKN-202ENST00000366892 URGCPQ8TCY9 931 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 TMEM169Q96HH4 297 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 IGSF21Q96ID5 467 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 CDCA3Q99618 268 aaPredicted RBP18.69■□□□□ 0.58
PRKN-202ENST00000366892 GBP3Q9H0R5 595 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 FZD8Q9H461 694 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 CD207Q9UJ71 328 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 HES2Q9Y543 173 aa18.69■□□□□ 0.58
PRKN-202ENST00000366892 MYH15Q9Y2K3 1946 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 E9PMD0 336 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 MBTPS2O43462 519 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 POMCP01189 267 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 RBM10P98175 930 aaKnown RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 SMAD2Q15796 467 aaKnown RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 CDR2LQ86X02 465 aaPredicted RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 ZBTB8OSQ8IWT0 167 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 GJD3Q8N144 294 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 MRPL43Q8N983 215 aaKnown RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 VN1R2Q8NFZ6 395 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 MMTAG2Q9BU76 263 aaKnown RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 BARX2Q9UMQ3 279 aaPredicted RBP18.68■□□□□ 0.58
PRKN-202ENST00000366892 DNM3Q9UQ16 869 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 MTMR6Q9Y217 621 aa18.68■□□□□ 0.58
PRKN-202ENST00000366892 EYA4O95677 639 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 ALDH2P05091 517 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 SLC11A1P49279 550 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 FAM187BQ17R55 369 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 SLC27A1Q6PCB7 646 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 BCL7CQ8WUZ0 217 aaPredicted RBP18.67■□□□□ 0.58
PRKN-202ENST00000366892 GAD1Q99259 594 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 TRIM6Q9C030 488 aaPredicted RBP18.67■□□□□ 0.58
PRKN-202ENST00000366892 C2orf40Q9H1Z8 148 aa18.67■□□□□ 0.58
PRKN-202ENST00000366892 ARL5CA6NH57 179 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 NAMPTP43490 491 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 COASYQ13057 564 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 SMAD4Q13485 552 aaKnown RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 KCNC3Q14003 757 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 SMC1AQ14683 1233 aaKnown RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 TMEM184AQ6ZMB5 413 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 VPS52Q8N1B4 723 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 KIFAP3Q92845 792 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 FAM193BQ96PV7 902 aaPredicted RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 NXF3Q9H4D5 531 aaKnown RBP18.66■□□□□ 0.58
PRKN-202ENST00000366892 MIOSQ9NXC5 875 aa18.66■□□□□ 0.58
PRKN-202ENST00000366892 VWA3AA6NCI4 1184 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 C2orf71A6NGG8 1288 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 TTLL13PA6NNM8 815 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 INPPL1O15357 1258 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 NPTXRO95502 500 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 CXCL14O95715 111 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 MLH1P40692 756 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 UBE2HP62256 183 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 PPP2R5AQ15172 486 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 MAPK6Q16659 721 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
PRKN-202ENST00000366892 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 DDX53Q86TM3 631 aaKnown RBP18.65■□□□□ 0.58
PRKN-202ENST00000366892 SMRP1Q8NCR6 262 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 GPT2Q8TD30 523 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 KHSRPQ92945 711 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRKN-202ENST00000366892 ZFP42Q96MM3 310 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 TMEM175Q9BSA9 504 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 APOL6Q9BWW8 343 aa18.65■□□□□ 0.58
PRKN-202ENST00000366892 PRKAG3Q9UGI9 489 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms