RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 ADAM15Q13444 863 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 DUSP6Q16828 381 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 HYIQ5T013 277 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PDE12Q6L8Q7 609 aaKnown RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 ZNF280BQ86YH2 543 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 KIFAP3Q92845 792 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 INTS4Q96HW7 963 aaKnown RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 IFT74Q96LB3 600 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PLIN2Q99541 437 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 FZD8Q9H461 694 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PDZD7Q9H5P4 517 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 TLE6Q9H808 572 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PUF60Q9UHX1 559 aaKnown RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 DNM3Q9UQ16 869 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PHLPP2Q6ZVD8 1323 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 A0A1B0GUA9 196 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 ARL5CA6NH57 179 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 HIDE1A8MVS5 230 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 INPPL1O15357 1258 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 HIP1RO75146 1068 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 BMP15O95972 392 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 POMCP01189 267 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 SYT1P21579 422 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 AKAP5P24588 427 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 SCNN1GP51170 649 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 RESTQ13127 1097 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 SMC1AQ14683 1233 aaKnown RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 SF3A1Q15459 793 aaKnown RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 MAPK6Q16659 721 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 RINT1Q6NUQ1 792 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 TMC7Q7Z402 723 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 HACE1Q8IYU2 909 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 DAW1Q8N136 415 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 VN1R2Q8NFZ6 395 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 IGSF21Q96ID5 467 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 ZFP42Q96MM3 310 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 FAM193BQ96PV7 902 aaPredicted RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 GAD1Q99259 594 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 CDCA3Q99618 268 aaPredicted RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 NT5C3AQ9H0P0 336 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 ZBP1Q9H171 429 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 UBN1Q9NPG3 1134 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 CD207Q9UJ71 328 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 BARX2Q9UMQ3 279 aaPredicted RBP11.44□□□□□ -0.58
YBX3-203ENST00000366286 USP20Q9Y2K6 914 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 C2orf16Q68DN1 1984 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 VWA8A3KMH1 1905 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 DENND4AQ7Z401 1863 aa11.44□□□□□ -0.58
YBX3-203ENST00000366286 ZMYM2Q9UBW7 1377 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 N4BP3O15049 544 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 MBTPS2O43462 519 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 CA8P35219 290 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 GRIN1Q05586 938 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 MAPK7Q13164 816 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 SMAD4Q13485 552 aaKnown RBP11.43□□□□□ -0.58
YBX3-203ENST00000366286 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 C1orf186Q6ZWK4 172 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 DDX53Q86TM3 631 aaKnown RBP11.43□□□□□ -0.58
YBX3-203ENST00000366286 CABP7Q86V35 215 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 VPS52Q8N1B4 723 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 CDK5RAP3Q96JB5 506 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 AK8Q96MA6 479 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 TMEM175Q9BSA9 504 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 NGRNQ9NPE2 291 aaKnown RBP11.43□□□□□ -0.58
YBX3-203ENST00000366286 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 KANSL3Q9P2N6 904 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 GIT1Q9Y2X7 761 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 CLIC4Q9Y696 253 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 TTC28Q96AY4 2481 aa11.43□□□□□ -0.58
YBX3-203ENST00000366286 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
YBX3-203ENST00000366286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.42□□□□□ -0.58
YBX3-203ENST00000366286 C2orf71A6NGG8 1288 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 CCDC169A6NNP5 214 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 ACKR2O00590 384 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
YBX3-203ENST00000366286 GUCY2CP25092 1073 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 NPTX2P47972 431 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 EFNA5P52803 228 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 SLC12A3P55017 1021 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 PEX3P56589 373 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 DSC1Q08554 894 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 DMP1Q13316 513 aaPredicted RBP11.42□□□□□ -0.58
YBX3-203ENST00000366286 EEF1DP3Q658K8 133 aa11.42□□□□□ -0.58
YBX3-203ENST00000366286 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms