RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PODXLO00592 558 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 PLA2G6O60733 806 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 ATP5DP30049 168 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 MSH2P43246 934 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 CCDC15Q0P6D6 951 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 MAPK7Q13164 816 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 ANKRD20A2Q5SQ80 823 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 ANKRD20A1Q5TYW2 823 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 ANKRD20A3Q5VUR7 823 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 NT5C3AQ9H0P0 336 aa20.49■□□□□ 0.87
CMTM3-201ENST00000361909 FERP16591 822 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 HYIQ5T013 277 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 DPY19L2P1Q6NXN4 242 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 ASRGL1Q7L266 308 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 RFFLQ8WZ73 363 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 RNF25Q96BH1 459 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 COA7Q96BR5 231 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 GOLPH3Q9H4A6 298 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 CTNNAL1Q9UBT7 734 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 PPP1R11O60927 126 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 SKAP2O75563 359 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 DDNO94850 711 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 AFPP02771 609 aaKnown RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 CCNB1P14635 433 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 ADCY7P51828 1080 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 BIRC2Q13490 618 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 ZNF341Q9BYN7 854 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 KCTD10Q9H3F6 313 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 ADARB2Q9NS39 739 aaKnown RBP20.48■□□□□ 0.87
CMTM3-201ENST00000361909 ZNF112Q9UJU3 913 aa20.48■□□□□ 0.87
CMTM3-201ENST00000361909 CHRNA3P32297 505 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 EXOC3L4Q17RC7 722 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 QRICH1Q2TAL8 776 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 ZDHHC24Q6UX98 284 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 JAMLQ86YT9 394 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 LRRC4CQ9HCJ2 640 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 ETAA1Q9NY74 926 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 ZFATQ9P243 1243 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 SYNGAP1Q96PV0 1343 aa20.47■□□□□ 0.87
CMTM3-201ENST00000361909 KIAA0391O15091 583 aaKnown RBP20.46■□□□□ 0.87
CMTM3-201ENST00000361909 SNUPNO95149 360 aaKnown RBP20.46■□□□□ 0.87
CMTM3-201ENST00000361909 TMEM253P0C7T8 217 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 NEFHP12036 1026 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 STAT2P52630 851 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 JAM2P57087 298 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 ENOX2Q16206 610 aaKnown RBP20.46■□□□□ 0.87
CMTM3-201ENST00000361909 GLIS3Q8NEA6 775 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 GGA3Q9NZ52 723 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 RASGRF2O14827 1237 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 DDX3YO15523 660 aaKnown RBP20.46■□□□□ 0.87
CMTM3-201ENST00000361909 GGPS1O95749 300 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 PPARDQ03181 441 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 TRAF1Q13077 416 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 ADAM9Q13443 819 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 SLC29A2Q14542 456 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 CFAP61Q8NHU2 1237 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 DYDC1Q8WWB3 177 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 CPSF2Q9P2I0 782 aaKnown RBP20.46■□□□□ 0.87
CMTM3-201ENST00000361909 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
CMTM3-201ENST00000361909 TLDC2A0PJX2 215 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 GTPBP10A4D1E9 387 aaKnown RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 PHF2O75151 1096 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 ATP5HO75947 161 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 KRT16P08779 473 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 RARGP13631 454 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 SPATA21Q7Z572 469 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 CHURC1Q8WUH1 139 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 GRAMD1AQ96CP6 724 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 AMNQ9BXJ7 453 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 TRIM31Q9BZY9 425 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 ARMCX3Q9UH62 379 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 IFI35P80217 286 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 MRPS35P82673 323 aaKnown RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 PPATQ06203 517 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 RNF43Q68DV7 783 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 ERICH1Q86X53 443 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 NAF1Q96HR8 494 aaKnown RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
CMTM3-201ENST00000361909 ADAM22Q9P0K1 906 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 PCYOX1Q9UHG3 505 aa20.45■□□□□ 0.86
CMTM3-201ENST00000361909 HIP1RO75146 1068 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PECAM1P16284 738 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PON1P27169 355 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PLTPP55058 493 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 INHBEP58166 350 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 IKQ13123 557 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-201ENST00000361909 ACVR2BQ13705 512 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 TAF11Q15544 211 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 PARP6Q2NL67 630 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 TRMT10CQ7L0Y3 403 aaKnown RBP20.44■□□□□ 0.86
CMTM3-201ENST00000361909 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
CMTM3-201ENST00000361909 SPICE1Q8N0Z3 855 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms