RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PROM2Q8N271 834 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 WRNIP1Q96S55 665 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ZC4H2Q9NQZ6 224 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 ECE2O60344 883 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 ASNSP08243 561 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 TBXAS1P24557 533 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-202ENST00000359082 HOXC10Q9NYD6 342 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 CDV3Q9UKY7 258 aaKnown RBP19.49■□□□□ 0.71
SHANK1-202ENST00000359082 IGSF1Q8N6C5 1336 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 MYO1DO94832 1006 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 PIGBQ92521 554 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 CALR3Q96L12 384 aaKnown RBP19.49■□□□□ 0.71
SHANK1-202ENST00000359082 YIPF3Q9GZM5 350 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 DDX56Q9NY93 547 aaKnown RBP19.49■□□□□ 0.71
SHANK1-202ENST00000359082 C2orf69Q8N8R5 385 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 FAM167BQ9BTA0 163 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 PIDD1Q9HB75 910 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 KCNA2P16389 499 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 THEMIS2Q5TEJ8 643 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 ICA1LQ8NDH6 482 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 CUL3Q13618 768 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 NCAPHQ15003 741 aa19.49■□□□□ 0.71
SHANK1-202ENST00000359082 CDKL3Q8IVW4 592 aaPredicted RBP19.49■□□□□ 0.71
SHANK1-202ENST00000359082 KCNA4P22459 653 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 FAM102AQ5T9C2 384 aaPredicted RBP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 B4GALNT2Q8NHY0 566 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SLC9A2Q9UBY0 812 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 MAGEA9P43362 315 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 HLFQ16534 295 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 TBC1D22BQ9NU19 505 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 FBXL5Q9UKA1 691 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 STAP1Q9ULZ2 295 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SAMD9LQ8IVG5 1584 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 ANKMY2Q8IV38 441 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SPATA33Q96N06 139 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SPON2Q9BUD6 331 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 DDX47Q9H0S4 455 aaKnown RBP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 ATP9BO43861 1147 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 ITPRIPL1Q6GPH6 555 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 ALG13Q9NP73 1137 aaKnown RBP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 KLHL11Q9NVR0 708 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SYNMO15061 1565 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 A8MXQ7 604 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 SEC24DO94855 1032 aaPredicted RBP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 MYBL1P10243 752 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 DGKHQ86XP1 1220 aa19.48■□□□□ 0.71
SHANK1-202ENST00000359082 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHANK1-202ENST00000359082 GMNCA6NCL1 334 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 APOL1O14791 398 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 TTC23LQ6PF05 361 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 ABCA8O94911 1581 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 BRAFP15056 766 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.47■□□□□ 0.71
SHANK1-202ENST00000359082 ASAP2O43150 1006 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 CHGBP05060 677 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 CCDC137Q6PK04 289 aaKnown RBP19.47■□□□□ 0.71
SHANK1-202ENST00000359082 NLRP14Q86W24 1093 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 OR6P1Q8NGX9 317 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 MRPL4Q9BYD3 311 aaKnown RBP19.47■□□□□ 0.71
SHANK1-202ENST00000359082 ANKARQ7Z5J8 1434 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 PJA2O43164 708 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 CPB1P15086 417 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 MMS22LQ6ZRQ5 1243 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 ADGRF4Q8IZF3 695 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 OR9Q1Q8NGQ5 310 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 RMDN1Q96DB5 314 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 HECW2Q9P2P5 1572 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 METP08581 1390 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 FGFR4P22455 802 aa19.47■□□□□ 0.71
SHANK1-202ENST00000359082 EML4Q9HC35 981 aaKnown RBP19.47■□□□□ 0.71
SHANK1-202ENST00000359082 GRID2IPA4D2P6 1211 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 ALDH18A1P54886 795 aaKnown RBP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 RCSD1Q6JBY9 416 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 WNT8AQ9H1J5 351 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 NPHP3-ACAD11A0A0J9YXS1 232 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 TTLL4Q14679 1199 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 IZUMO3Q5VZ72 239 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 GPD1LQ8N335 351 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 NSUN6Q8TEA1 469 aaKnown RBP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 FARP1Q9Y4F1 1045 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 RPAP1Q9BWH6 1393 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 PP2D1A8MPX8 630 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 SULT1E1P49888 294 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 CEP95Q96GE4 821 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 LXNQ9BS40 222 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 C2orf40Q9H1Z8 148 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 PALLDQ8WX93 1383 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 KIF12Q96FN5 646 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 ABHD8Q96I13 439 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 ARHGEF9O43307 516 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 PRDX5P30044 214 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 KRT76Q01546 638 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 CC2D1AQ6P1N0 951 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms