RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 GTF2H1P32780 548 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 COPB2P35606 906 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 NOP2P46087 812 aaKnown RBP16.13■□□□□ 0.17
GABPB1-202ENST00000359031 FAM193AP78312 1265 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 SP4Q02446 784 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 EMC2Q15006 297 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ARHGAP44Q17R89 818 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 BRDTQ58F21 947 aaPredicted RBP16.13■□□□□ 0.17
GABPB1-202ENST00000359031 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 PSMB7Q99436 277 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 TMEM117Q9H0C3 514 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ACBD3Q9H3P7 528 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 TMEM8AQ9HCN3 771 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ZNF302Q9NR11 478 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 BTBD7Q9P203 1132 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ARHGAP28Q9P2N2 729 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
GABPB1-202ENST00000359031 CXCL11O14625 94 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SMC1AQ14683 1233 aaKnown RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 RPS6KA1Q15418 735 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GLE1Q53GS7 698 aaKnown RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 KRT39Q6A163 491 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SLFN11Q7Z7L1 901 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CBWD2Q8IUF1 395 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 ARHGEF19Q8IW93 802 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 PBKQ96KB5 322 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 MFSD14AQ96MC6 490 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 UBE2TQ9NPD8 197 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 IGKV6D-21A0A0A0MT36 114 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GOLGA8IPA6NC78 632 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GOLGA8JA6NMD2 632 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 KIAA0391O15091 583 aaKnown RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 LRRN2O75325 713 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 KIF4AO95239 1232 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 TNFAIP3P21580 790 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 NF2P35240 595 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GALCP54803 685 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SP2Q02086 613 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CYP24A1Q07973 514 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CASP8Q14790 479 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CYFIP1Q7L576 1253 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 ANKRD13AQ8IZ07 590 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 GPD1LQ8N335 351 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 ZSWIM2Q8NEG5 633 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 PARD3BQ8TEW8 1205 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CTNNBL1Q8WYA6 563 aaPredicted RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 RFFLQ8WZ73 363 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 HHIPL1Q96JK4 782 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 MPHOSPH6Q99547 160 aaKnown RBP16.12■□□□□ 0.17
GABPB1-202ENST00000359031 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 PCDH10Q9P2E7 1040 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 TELO2Q9Y4R8 837 aa16.12■□□□□ 0.17
GABPB1-202ENST00000359031 SPDYE5A6NIY4 337 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 LRRIQ3A6PVS8 624 aaPredicted RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 FOXN3O00409 490 aaPredicted RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 HNRNPDLO14979 420 aaKnown RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 SLC25A27O95847 323 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 TNFRSF8P28908 595 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 OAS2P29728 719 aaKnown RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 GPC3P51654 580 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 SOX10P56693 466 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 NIFKQ9BYG3 293 aaKnown RBP16.11■□□□□ 0.17
GABPB1-202ENST00000359031 ELP3Q9H9T3 547 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 KIAA1586Q9HCI6 787 aa16.11■□□□□ 0.17
GABPB1-202ENST00000359031 RFC5P40937 340 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 NOGQ13253 232 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 NEDD9Q14511 834 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 C8orf74Q6P047 294 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-202ENST00000359031 SEPT14Q6ZU15 432 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 NCAPG2Q86XI2 1143 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 BICD1Q96G01 975 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 SELENOOQ9BVL4 669 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
GABPB1-202ENST00000359031 RBM12Q9NTZ6 932 aaKnown RBP16.1■□□□□ 0.17
GABPB1-202ENST00000359031 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-202ENST00000359031 AGTPBP1Q9UPW5 1226 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 KCNH4Q9UQ05 1017 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
GABPB1-202ENST00000359031 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms