RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 GARTP22102 1010 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 FECHP22830 423 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 NPTX2P47972 431 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 NPEPPSP55786 919 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 CDC42EP1Q00587 391 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 LRIT3Q3SXY7 679 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZNF484Q5JVG2 852 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 ANKRD33Q7Z3H0 272 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 MAP4K3Q8IVH8 894 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 DAW1Q8N136 415 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 KIF18AQ8NI77 898 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 GPR20Q99678 358 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 DHX33Q9H6R0 707 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 STARD7Q9NQZ5 370 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 DMAC2Q9NW81 257 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 FBXL5Q9UKA1 691 aa11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-201ENST00000359005 TTC26A0AVF1 554 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 K7ERI5 159 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 KIAA0355O15063 1070 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 SLC16A4O15374 487 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 PPFIA4O75335 1185 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 TNNT1P13805 278 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 TMOD1P28289 359 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 CYP2J2P51589 502 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 SPA17Q15506 151 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 EXOC3L4Q17RC7 722 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 VPS36Q86VN1 386 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 TMEM161BQ8NDZ6 487 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 COPS5Q92905 334 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 CCDC42Q96M95 316 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 FIZ1Q96SL8 496 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 DEF6Q9H4E7 631 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 PLAGL2Q9UPG8 496 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.53
TRAPPC4-201ENST00000359005 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
TRAPPC4-201ENST00000359005 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 CLIC2O15247 247 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 AKAP3O75969 853 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 STBD1O95210 358 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARIH2O95376 493 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 CLTBP09497 229 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 ANXA13P27216 316 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 HNRNPH3P31942 346 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 HOXD13P35453 343 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 LIG4P49917 911 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 BFSP1Q12934 665 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 DUSP28Q4G0W2 176 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARHGAP29Q52LW3 1261 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 SFMBT2Q5VUG0 894 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 C16orf59Q7L2K0 433 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 TRMT1LQ7Z2T5 733 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZNF710Q8N1W2 664 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 SLC43A3Q8NBI5 491 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 SPAG5Q96R06 1193 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 TSGA10Q9BZW7 698 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 MYO1AQ9UBC5 1043 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 TBX21Q9UL17 535 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 SIK3Q9Y2K2 1263 aa11.7□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZMYM2Q9UBW7 1377 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 VCANP13611 3396 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 LRRIQ4A6NIV6 560 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARVCFO00192 962 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 PMM2O15305 246 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 KIF5CO60282 957 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 GTF2H1P32780 548 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 ARL2P36404 184 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TUBB2AQ13885 445 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TARBP2Q15633 366 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 MEA1Q16626 185 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 DGKDQ16760 1214 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 E4F1Q66K89 784 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM139Q8IV31 216 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 POMGNT1Q8WZA1 660 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 VWCEQ96DN2 955 aa11.69□□□□□ -0.54
TRAPPC4-201ENST00000359005 PPP1R13BQ96KQ4 1090 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms