RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 COMTP21964 271 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 YWHABP31946 246 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 EIF3BP55884 814 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 PEX3P56589 373 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 MAP2K1Q02750 393 aaPredicted RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 MTMR1Q13613 665 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 TKFCQ3LXA3 575 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 SPDYE2Q495Y8 402 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 RNF187Q5TA31 235 aaPredicted RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 NOP9Q86U38 636 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 PSMD1Q99460 953 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 ZNF341Q9BYN7 854 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 TXLNGYQ9BZA5 131 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 LRRC4CQ9HCJ2 640 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 AGO4Q9HCK5 861 aaKnown RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 ZDHHC18Q9NUE0 388 aa9.26□□□□□ -0.93
RFX3-202ENST00000358730 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
RFX3-202ENST00000358730 ZNF536O15090 1300 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 ZNFX1Q9P2E3 1918 aaKnown RBP9.25□□□□□ -0.93
RFX3-202ENST00000358730 GMNCA6NCL1 334 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 BACH1O14867 736 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 TRAPPC3O43617 180 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 ADRB2P07550 413 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 HSPA6P17066 643 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 CHRNA3P32297 505 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SPP2Q13103 211 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 FBXW10Q5XX13 1052 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 DENND2CQ68D51 928 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 CPXCR1Q8N123 301 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 PRELID2Q8N945 189 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 FBXO25Q8TCJ0 367 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 PCDHB18PQ96TA0 734 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 TMEM117Q9H0C3 514 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 ACP6Q9NPH0 428 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.25□□□□□ -0.93
RFX3-202ENST00000358730 TCEAL9Q9UHQ7 104 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 CAPN7Q9Y6W3 813 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 H0YHG0 523 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
RFX3-202ENST00000358730 CYP26A1O43174 497 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SPOPO43791 374 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SHBGP04278 402 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 ALAS1P13196 640 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 PTGER2P43116 358 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 PMS2P54278 862 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 IFT88Q13099 833 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 UGCGQ16739 394 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SPDYCQ5MJ68 293 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 NIPA1Q7RTP0 329 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 SLC47A2Q86VL8 602 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 CCDC127Q96BQ5 260 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 KREMEN1Q96MU8 473 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 DEFB129Q9H1M3 183 aa9.25□□□□□ -0.93
RFX3-202ENST00000358730 NOCTQ9UK39 431 aaKnown RBP9.25□□□□□ -0.93
RFX3-202ENST00000358730 ASTN2O75129 1339 aaPredicted RBP9.25□□□□□ -0.93
RFX3-202ENST00000358730 CAND2O75155 1236 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 MMEP08473 750 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 CHRNB2P17787 502 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 MRPS9P82933 396 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 GTF2BQ00403 316 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 RASA3Q14644 834 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 SNRNP35Q16560 246 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 FAM102BQ5T8I3 360 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PLA2G4FQ68DD2 849 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 ZDHHC24Q6UX98 284 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 YTHDF3Q7Z739 585 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 CBWD2Q8IUF1 395 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 FAM71AQ8IYT1 594 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 ZNF564Q8TBZ8 553 aaPredicted RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 SAAL1Q96ER3 474 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 BTBD6Q96KE9 485 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 NUP85Q9BW27 656 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 EPB41L4BQ9H329 900 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PABPC3Q9H361 631 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 SMIM23A6NLE4 172 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 ASNSP08243 561 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PAEPP09466 180 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 NUDT17P0C025 328 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PTGIRP43119 386 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 CDR1P51861 262 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 TCEAL1Q15170 157 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PCNX4Q63HM2 1172 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 TTC27Q6P3X3 843 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 CCDC137Q6PK04 289 aaKnown RBP9.24□□□□□ -0.93
RFX3-202ENST00000358730 CPNE8Q86YQ8 564 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 MCF2L2Q86YR7 1114 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 TMEM174Q8WUU8 243 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 CNKSR2Q8WXI2 1034 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 RAPGEF5Q92565 580 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 ZNF653Q96CK0 615 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 RPS6KC1Q96S38 1066 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 IWS1Q96ST2 819 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 KIFC3Q9BVG8 833 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 WNT8AQ9H1J5 351 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 GRHL1Q9NZI5 618 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
RFX3-202ENST00000358730 TRPC6Q9Y210 931 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms