RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 AP5Z1O43299 807 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 EVI5O60447 810 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 PRKCBP05771 671 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 RAG1P15918 1043 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 AKAP5P24588 427 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ACOT2P49753 483 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 DSC3Q14574 896 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ANO6Q4KMQ2 910 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 CENPPQ6IPU0 288 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 MAP4K3Q8IVH8 894 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 TCP11Q8WWU5 503 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 SCLT1Q96NL6 688 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
LIG4-201ENST00000356922 NFKBIZQ9BYH8 718 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 NXF3Q9H4D5 531 aaKnown RBP4.42□□□□□ -1.7
LIG4-201ENST00000356922 ST6GALNAC4Q9H4F1 302 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 SAMSN1Q9NSI8 373 aaKnown RBP4.42□□□□□ -1.7
LIG4-201ENST00000356922 MIOSQ9NXC5 875 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 MYO9BQ13459 2157 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 PTPRJQ12913 1337 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 GRXCR1A8MXD5 290 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 F8W810 466 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ENPP3O14638 875 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 RPS6KA5O75582 802 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 AKAP3O75969 853 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 CXCL10P02778 98 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 HARSP12081 509 aaKnown RBP4.42□□□□□ -1.7
LIG4-201ENST00000356922 NLRP12P59046 1061 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 DLG4P78352 724 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 DEFB103AP81534 67 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 KNOP1Q1ED39 458 aaKnown RBP4.42□□□□□ -1.7
LIG4-201ENST00000356922 MFSD5Q6N075 450 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ZNF365Q70YC5 407 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 LUZP1Q86V48 1076 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 CBWD2Q8IUF1 395 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 RABGGTAQ92696 567 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 CCDC34Q96HJ3 373 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 IFT74Q96LB3 600 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ZFP42Q96MM3 310 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 ADAM2Q99965 735 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 AGPAT3Q9NRZ7 376 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 AGPAT5Q9NUQ2 364 aa4.42□□□□□ -1.7
LIG4-201ENST00000356922 PIN4Q9Y237 131 aaKnown RBP4.42□□□□□ -1.7
LIG4-201ENST00000356922 ASAP2O43150 1006 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GAS2O43903 313 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 ARHGEF15O94989 841 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MYL1P05976 194 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ATP1A3P13637 1013 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 DEKP35659 375 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PRPF4BQ13523 1007 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 IQCB1Q15051 598 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MAPK6Q16659 721 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 BMT2Q1RMZ1 405 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 C1orf220Q5T0J3 134 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 TSHZ1Q6ZSZ6 1077 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CATSPER4Q7RTX7 472 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ZNF410Q86VK4 478 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 DHX40Q8IX18 779 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 THNSL1Q8IYQ7 743 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 RNF214Q8ND24 703 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CAGE1Q8TC20 777 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ZMAT2Q96NC0 199 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 PYM1Q9BRP8 204 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 GCOM2Q9BZD3 368 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 CDT1Q9H211 546 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TMEM134Q9H6X4 195 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 C17orf75Q9HAS0 396 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 DMAC2Q9NW81 257 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 KLK14Q9P0G3 267 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ANKFY1Q9P2R3 1169 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PPME1Q9Y570 386 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MROH7Q68CQ1 1323 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 A0A0B4J269 797 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 HNRNPDLO14979 420 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 ADRB2P07550 413 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 FGFR1P11362 822 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MYOGP15173 224 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GAP43P17677 238 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MAGEA10P43363 369 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 RGS19P49795 217 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SMTNP53814 917 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 FAM187BQ17R55 369 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GLIPR1L2Q4G1C9 344 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TMEM240Q5SV17 173 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ATF7IP2Q5U623 682 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 LMBRD2Q68DH5 695 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 FAM117BQ6P1L5 589 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 AGMOQ6ZNB7 445 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 LRRC55Q6ZSA7 311 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MYOCDQ8IZQ8 938 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GUF1Q8N442 669 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 CCDC155Q8N6L0 562 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 NELFBQ8WX92 580 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 BORCS6Q96GS4 357 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 JPH2Q9BR39 696 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 PAAF1Q9BRP4 392 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TIPINQ9BVW5 301 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms