RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 RFWD2Q8NHY2 731 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 TRIM54Q9BYV2 358 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 SIK2Q9H0K1 926 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ANO9A1A5B4 782 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 APOA1P02647 267 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 CACNB3P54284 484 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 DMC1Q14565 340 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 NLRP10Q86W26 655 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 PROM2Q8N271 834 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ALG13Q9NP73 1137 aaKnown RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 CCDC159P0C7I6 412 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 GNAT1P11488 350 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 IL10P22301 178 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 TRPC1P48995 793 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 VAMP7P51809 220 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 SNF8Q96H20 258 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 INTS2Q9H0H0 1204 aaKnown RBP17.02■□□□□ 0.31
RXRA-201ENST00000356384 ERFP50548 548 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 CYTH1Q15438 398 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 DALRD3Q5D0E6 543 aaKnown RBP17.02■□□□□ 0.31
RXRA-201ENST00000356384 RARS2Q5T160 578 aaKnown RBP17.02■□□□□ 0.31
RXRA-201ENST00000356384 RHPN2Q8IUC4 686 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.31
RXRA-201ENST00000356384 DCAF4Q8WV16 495 aa17.02■□□□□ 0.31
RXRA-201ENST00000356384 OTUB1Q96FW1 271 aaPredicted RBP17.02■□□□□ 0.31
RXRA-201ENST00000356384 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.312e-6■■□□□ 13.1
RXRA-201ENST00000356384 PIK3R2O00459 728 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 KRT7P08729 469 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 CHRNA3P32297 505 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 SSTR3P32745 418 aaPredicted RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 DRAP1Q14919 205 aaPredicted RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 ATP11CQ8NB49 1132 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 C1orf54Q8WWF1 131 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 ADNPQ9H2P0 1102 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 CPVLQ9H3G5 476 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 SERPINI2O75830 405 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 MRPS15P82914 257 aaKnown RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 NCAPHQ15003 741 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 OLFM3Q96PB7 478 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 HDAC6Q9UBN7 1215 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 ZBTB5O15062 677 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 C21orf2O43822 256 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 ATP9BO43861 1147 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 SUPT3HO75486 399 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 DAB1O75553 588 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 CCDC137Q6PK04 289 aaKnown RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 USP17L6PQ6QN14 398 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 KIAA2013Q8IYS2 634 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 ATG3Q9NT62 314 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 INSRP06213 1382 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 DFFAO00273 331 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 CALR3Q96L12 384 aaKnown RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 SLC7A5P2Q9GIP4 190 aa17.01■□□□□ 0.31
RXRA-201ENST00000356384 PRDM5Q9NQX1 630 aaPredicted RBP17.01■□□□□ 0.31
RXRA-201ENST00000356384 CYP2D6P10635 497 aa17■□□□□ 0.31
RXRA-201ENST00000356384 TBXAS1P24557 533 aaPredicted RBP17■□□□□ 0.31
RXRA-201ENST00000356384 MAP3K10Q02779 954 aa17■□□□□ 0.31
RXRA-201ENST00000356384 TRIM60Q495X7 471 aa17■□□□□ 0.31
RXRA-201ENST00000356384 IZUMO3Q5VZ72 239 aa17■□□□□ 0.31
RXRA-201ENST00000356384 DGKHQ86XP1 1220 aa17■□□□□ 0.31
RXRA-201ENST00000356384 RMDN1Q96DB5 314 aa17■□□□□ 0.31
RXRA-201ENST00000356384 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
RXRA-201ENST00000356384 KDM1AO60341 852 aa17■□□□□ 0.31
RXRA-201ENST00000356384 CCDC22O60826 627 aa17■□□□□ 0.31
RXRA-201ENST00000356384 FAM102AQ5T9C2 384 aaPredicted RBP17■□□□□ 0.31
RXRA-201ENST00000356384 ARAP3Q8WWN8 1544 aa17■□□□□ 0.31
RXRA-201ENST00000356384 POTEB3A0JP26 581 aa17■□□□□ 0.31
RXRA-201ENST00000356384 POTECB2RU33 542 aa17■□□□□ 0.31
RXRA-201ENST00000356384 KRT8P05787 483 aa17■□□□□ 0.31
RXRA-201ENST00000356384 VCAM1P19320 739 aa17■□□□□ 0.31
RXRA-201ENST00000356384 ICE2Q659A1 982 aa17■□□□□ 0.31
RXRA-201ENST00000356384 POTEBQ6S5H4 581 aa17■□□□□ 0.31
RXRA-201ENST00000356384 KDELC2Q7Z4H8 507 aa17■□□□□ 0.31
RXRA-201ENST00000356384 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
RXRA-201ENST00000356384 ZNF197O14709 1029 aa17■□□□□ 0.31
RXRA-201ENST00000356384 KNOP1Q1ED39 458 aaKnown RBP17■□□□□ 0.31
RXRA-201ENST00000356384 KDM4CQ9H3R0 1056 aa17■□□□□ 0.31
RXRA-201ENST00000356384 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms