RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NAP1L3Q99457 506 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 ZSWIM1Q9BR11 485 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 TRIM7Q9C029 511 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 NSRP1Q9H0G5 558 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 EBF2Q9HAK2 575 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 POLLQ9UGP5 575 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 INTUQ9ULD6 942 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 TTC7AQ9ULT0 858 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 EME2A4GXA9 379 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 GDF11O95390 407 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 EEF2P13639 858 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 CHRNB2P17787 502 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 COILP38432 576 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 COPS2P61201 443 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 MGAT5Q09328 741 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 ODR4Q5SWX8 454 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SLFN12Q8IYM2 578 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 UBL4BQ8N7F7 174 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SYT11Q9BT88 431 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 KIF9Q9HAQ2 790 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 EMSYQ7Z589 1322 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 H0Y3Z8 333 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 SPAG7O75391 227 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 CHRNA3P32297 505 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 CALCOCO2Q13137 446 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 RPGRQ92834 1020 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 TGS1Q96RS0 853 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 HEMGNQ9BXL5 484 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 DNAJC18Q9H819 358 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 KCNQ5Q9NR82 932 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 NOP53Q9NZM5 478 aaKnown RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
PTPRA-203ENST00000356147 FRMD4BQ9Y2L6 1034 aa10.89□□□□□ -0.67
PTPRA-203ENST00000356147 PIAS1O75925 651 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SUN1O94901 812 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 STX2P32856 288 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 GJC1P36383 396 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 MSH2P43246 934 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 KRT17Q04695 432 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 CGB2Q6NT52 195 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 TAOK1Q7L7X3 1001 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SPATA21Q7Z572 469 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 HERPUD2Q9BSE4 406 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 YIPF3Q9GZM5 350 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ETNK1Q9HBU6 452 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 AGPAT3Q9NRZ7 376 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ADAM22Q9P0K1 906 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 GGA1Q9UJY5 639 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ZMYND8Q9ULU4 1186 aaPredicted RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 IGKV6D-41A0A0C4DH26 115 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 CYP26A1O43174 497 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 TOM1O60784 492 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 GSTA1P08263 222 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 RARGP13631 454 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 NOVP48745 357 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 PPP3CAQ08209 521 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ZNF268Q14587 947 aaPredicted RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 LRCH2Q5VUJ6 765 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 HS2ST1Q7LGA3 356 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SLC47A2Q86VL8 602 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 SLC13A5Q86YT5 568 aaPredicted RBP10.88□□□□□ -0.67
PTPRA-203ENST00000356147 CNBD1Q8NA66 436 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
PTPRA-203ENST00000356147 ARFGEF1Q9Y6D6 1849 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 SLC16A3O15427 465 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 PEX5P50542 639 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 RRP1BQ14684 758 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 GPATCH4Q5T3I0 446 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ZNF449Q6P9G9 518 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 PPM1KQ8N3J5 372 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 LAMB2P55268 1798 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 EP400Q96L91 3159 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 TP73O15350 636 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 CFBP00751 764 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 TARSP26639 723 aaKnown RBP10.87□□□□□ -0.67
PTPRA-203ENST00000356147 GPC5P78333 572 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 BNIP1Q12981 228 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ANKRD20A2Q5SQ80 823 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ANKRD20A1Q5TYW2 823 aa10.87□□□□□ -0.67
PTPRA-203ENST00000356147 ANKRD20A3Q5VUR7 823 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms