RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KITP10721 976 aa19.14■□□□□ 0.66
COL18A1-202ENST00000355480 TBCCQ15814 346 aa19.14■□□□□ 0.66
COL18A1-202ENST00000355480 EPM2AIP1Q7L775 607 aaPredicted RBP19.14■□□□□ 0.66
COL18A1-202ENST00000355480 DYRK4Q9NR20 520 aa19.14■□□□□ 0.66
COL18A1-202ENST00000355480 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 UBA6A0AVT1 1052 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-202ENST00000355480 E2F6O75461 281 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 MDM2Q00987 491 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-202ENST00000355480 GPS1Q13098 491 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 OR6P1Q8NGX9 317 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 PRKCBP05771 671 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 TRIM72Q6ZMU5 477 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 CYTH2Q99418 400 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 NDFIP2Q9NV92 336 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 BFARQ9NZS9 450 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 DFFAO00273 331 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 CEP55Q53EZ4 464 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 HIBCHQ6NVY1 386 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-202ENST00000355480 CC2D1AQ6P1N0 951 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-202ENST00000355480 RHOT1Q8IXI2 618 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 YAF2Q8IY57 180 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 GUF1Q8N442 669 aaKnown RBP19.14■□□□□ 0.65
COL18A1-202ENST00000355480 TNIP3Q96KP6 325 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 TRIM62Q9BVG3 475 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 ZNRF3Q9ULT6 936 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 RFX7Q2KHR2 1363 aa19.14■□□□□ 0.65
COL18A1-202ENST00000355480 CCDC195A0A1B0GUA6 201 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 ZNF235Q14590 738 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 TMEM259Q4ZIN3 620 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 SARM1Q6SZW1 724 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 FAM47EQ6ZV65 393 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 SMAD1Q15797 465 aaKnown RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 LMBRD2Q68DH5 695 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 FMR1NBQ8N0W7 255 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 ZC3H15Q8WU90 426 aaKnown RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 LZICQ8WZA0 190 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 NR1H3Q13133 447 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 COG2Q14746 738 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 ACTR5Q9H9F9 607 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 GRIK1P39086 918 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 RMDN1Q96DB5 314 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 TJP2Q9UDY2 1190 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 FOXO4P98177 505 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 TAF11Q15544 211 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 TAF1CQ15572 869 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-202ENST00000355480 RAPGEF5Q92565 580 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 NRBF2Q96F24 287 aa19.13■□□□□ 0.65
COL18A1-202ENST00000355480 SYNDIG1LA6NDD5 238 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 SKIP12755 728 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 CDK17Q00537 523 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 A0A0G2JLW4 131 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 ANO9A1A5B4 782 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 NCK2O43639 380 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 EYA4O95677 639 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 CDH6P55285 790 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 MORF4L2Q15014 288 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 C12orf60Q5U649 245 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PBXIP1Q96AQ6 731 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
COL18A1-202ENST00000355480 ABCA8O94911 1581 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 DNAJC6O75061 913 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 SPATA2LQ8IUW3 424 aaPredicted RBP19.12■□□□□ 0.65
COL18A1-202ENST00000355480 TBC1D16Q8TBP0 767 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 POLR3CQ9BUI4 534 aaPredicted RBP19.12■□□□□ 0.65
COL18A1-202ENST00000355480 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PMS2P54278 862 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PDIA2Q13087 525 aaKnown RBP19.12■□□□□ 0.65
COL18A1-202ENST00000355480 GLYCTKQ8IVS8 523 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 FAM96AQ9H5X1 160 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PARVAQ9NVD7 372 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PRDM15P57071 1507 aaPredicted RBP19.12■□□□□ 0.65
COL18A1-202ENST00000355480 KRT14P02533 472 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 THEMIS2Q5TEJ8 643 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 TUFT1Q9NNX1 390 aa19.12■□□□□ 0.65
COL18A1-202ENST00000355480 PNPLA7Q6ZV29 1317 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 TRAPPC3O43617 180 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 PYGBP11216 843 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 ANO4Q32M45 955 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 RNF135Q8IUD6 432 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 ZBED8Q8IZ13 594 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 BTBD6Q96KE9 485 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 WNT8AQ9H1J5 351 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 RGL1Q9NZL6 768 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 SCOCQ9UIL1 159 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 A0A087WUV0 522 aaPredicted RBP19.11■□□□□ 0.65
COL18A1-202ENST00000355480 NFRKBQ6P4R8 1299 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 ZFXP17010 805 aaPredicted RBP19.11■□□□□ 0.65
COL18A1-202ENST00000355480 CEP19Q96LK0 163 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 TRIM54Q9BYV2 358 aa19.11■□□□□ 0.65
COL18A1-202ENST00000355480 GYG2O15488 501 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 ASAP2O43150 1006 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 NMT1P30419 496 aaKnown RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 CHRNA3P32297 505 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 SCARF1Q14162 830 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 BPIFA3Q9BQP9 254 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
COL18A1-202ENST00000355480 TRIM33Q9UPN9 1127 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 WDR72Q3MJ13 1102 aa19.1■□□□□ 0.65
COL18A1-202ENST00000355480 NUDT18Q6ZVK8 323 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms