RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
CD44-205ENST00000352818 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.1□□□□□ -0.95
CD44-205ENST00000352818 USP9XQ93008 2570 aaPredicted RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 PVALEFA0A1B0GWK0 134 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 TMEM232C9JQI7 657 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 FSCN2O14926 492 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 NKRFO15226 690 aaKnown RBP eCLIP9.09□□□□□ -0.95
CD44-205ENST00000352818 NARSO43776 548 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 DGKIO75912 1065 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 TPM2P07951 284 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CYP3A4P08684 503 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 SKILP12757 684 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CASP1P29466 404 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CDC25AP30304 524 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CIITAP33076 1130 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 SREBF1P36956 1147 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 PSEN2P49810 448 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 STAT2P52630 851 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 SNAP25P60880 206 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 ARHGAP1Q07960 439 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 STIM1Q13586 685 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 BTG3Q14201 252 aaPredicted RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 Q4G0T1 1027 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 BRDTQ58F21 947 aaPredicted RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 ARMCX5Q6P1M9 558 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CCDC62Q6P9F0 684 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 FOXR2Q6PJQ5 311 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 UNQ6494/PRO21346Q6UXR6 183 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 APTXQ7Z2E3 356 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 GIMAP8Q8ND71 665 aaPredicted RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 NOC3LQ8WTT2 800 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 CHURC1Q8WUH1 139 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 HAS1Q92839 578 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 NAP1L5Q96NT1 182 aaPredicted RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 BLZF1Q9H2G9 400 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 RANBP17Q9H2T7 1088 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 TMX1Q9H3N1 280 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 KCNMB3Q9NPA1 279 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 LIMA1Q9UHB6 759 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 USP18Q9UMW8 372 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
CD44-205ENST00000352818 CTNND2Q9UQB3 1225 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 STK24Q9Y6E0 443 aa9.09□□□□□ -0.95
CD44-205ENST00000352818 CELSR3Q9NYQ7 3312 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 ITIH6Q6UXX5 1313 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 LRRC10BA6NIK2 292 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 PSMA7O14818 248 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 ALAS1P13196 640 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 CDK11BP21127 795 aaKnown RBP9.08□□□□□ -0.96
CD44-205ENST00000352818 EDNRBP24530 442 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 PBX1P40424 430 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 TXKP42681 527 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 TBC1D8BQ0IIM8 1120 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 BAATQ14032 418 aaPredicted RBP9.08□□□□□ -0.96
CD44-205ENST00000352818 NR1I3Q14994 352 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 KRT79Q5XKE5 535 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 SPECC1LQ69YQ0 1117 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 LLGL2Q6P1M3 1020 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 C7orf31Q8N865 590 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 NETO1Q8TDF5 533 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 DHTKD1Q96HY7 919 aaPredicted RBP9.08□□□□□ -0.96
CD44-205ENST00000352818 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 ADAM7Q9H2U9 754 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 THAP9Q9H5L6 903 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 BLOC1S4Q9NUP1 217 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 ADD3Q9UEY8 706 aaKnown RBP9.08□□□□□ -0.96
CD44-205ENST00000352818 FEM1BQ9UK73 627 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 PRR12Q9ULL5 1215 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 DUSP12Q9UNI6 340 aa9.08□□□□□ -0.96
CD44-205ENST00000352818 ABCB11O95342 1321 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 KIF2AO00139 706 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 OPLAHO14841 1288 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 CCP110O43303 1012 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 LRRN2O75325 713 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 F2P00734 622 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 TUBB4AP04350 444 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 CTSHP09668 335 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 ZNF286BP0CG31 522 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 TXNP10599 105 aaKnown RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 HOXD8P13378 290 aaPredicted RBP9.07□□□□□ -0.96
CD44-205ENST00000352818 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 EHHADHQ08426 723 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 MFSD10Q14728 455 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 FILIP1LQ4L180 1135 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 USP17L6PQ6QN14 398 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 NSMFQ6X4W1 530 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 UNC13DQ70J99 1090 aa9.07□□□□□ -0.96
CD44-205ENST00000352818 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms