RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HSD3B7Q9H2F3 369 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 POLLQ9UGP5 575 aa15.75■□□□□ 0.11
NUP50-201ENST00000347635 SMIM24O75264 130 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 RPS6KA5O75582 802 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 RNF8O76064 485 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 KRT17Q04695 432 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 TRIM59Q8IWR1 403 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 PPP4R1Q8TF05 950 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 ZNF526Q8TF50 670 aaPredicted RBP15.74■□□□□ 0.11
NUP50-201ENST00000347635 MTMR8Q96EF0 704 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 NAGPAQ9UK23 515 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 TXNDC9O14530 226 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 MYO1EQ12965 1108 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
NUP50-201ENST00000347635 ERP44Q9BS26 406 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 RAVER2Q9HCJ3 691 aaKnown RBP15.74■□□□□ 0.11
NUP50-201ENST00000347635 RGL1Q9NZL6 768 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 MT-ND3P03897 115 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 FKBP1AP62942 108 aaKnown RBP15.74■□□□□ 0.11
NUP50-201ENST00000347635 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 CLEC10AQ8IUN9 316 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 C1orf54Q8WWF1 131 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 DYNLT1P63172 113 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 MTMR1Q13613 665 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 COG2Q14746 738 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 CCDC117Q8IWD4 279 aaPredicted RBP15.74■□□□□ 0.11
NUP50-201ENST00000347635 ACTRT1Q8TDG2 376 aa15.74■□□□□ 0.11
NUP50-201ENST00000347635 LXNQ9BS40 222 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 LOC102724159A0A0B4J2E5 919 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 WDR91A4D1P6 747 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 WDR64B1ANS9 1081 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TCP11X1B4DZS4 312 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TJP3O95049 919 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TMEM191BP0C7N4 346 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 AMPD2Q01433 879 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 PWP2Q15269 919 aaKnown RBP15.73■□□□□ 0.11
NUP50-201ENST00000347635 PACS2Q86VP3 889 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 ZNF280CQ8ND82 737 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 SCYL2Q6P3W7 929 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 SPATA21Q7Z572 469 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TRIM42Q8IWZ5 723 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 HAUS1Q96CS2 278 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TTC25Q96NG3 672 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 HOXD10P28358 340 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 SURF1Q15526 300 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 ZNF662Q6ZS27 426 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
NUP50-201ENST00000347635 VCPKMTQ9H867 229 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 PPP2R3BQ9Y5P8 575 aa15.73■□□□□ 0.11
NUP50-201ENST00000347635 H7C0C1 242 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 PON1P27169 355 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ATP5OP48047 213 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 WDR59Q6PJI9 974 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 PDCD7Q8N8D1 485 aaKnown RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 SLC16A4O15374 487 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 IRX4P78413 519 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 PYROXD1Q8WU10 500 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 RPAP3Q9H6T3 665 aaPredicted RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 PJA2O43164 708 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ABL1P00519 1130 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 MCPH1Q8NEM0 835 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 GRAMD1AQ96CP6 724 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 RBM41Q96IZ5 413 aaKnown RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 TLR10Q9BXR5 811 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 CXorf56Q9H5V9 222 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 GDF3Q9NR23 364 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ADAM22Q9P0K1 906 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ARL2BPQ9Y2Y0 163 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ASB14A6NK59 587 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 CCT8L1PA6NM43 557 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 KIF1CO43896 1103 aaKnown RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 LMNAP02545 664 aaKnown RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 CYP11B2P19099 503 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
NUP50-201ENST00000347635 RCN2Q14257 317 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 KRT39Q6A163 491 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 RINT1Q6NUQ1 792 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 ETNK1Q9HBU6 452 aa15.72■□□□□ 0.11
NUP50-201ENST00000347635 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 MCF2LO15068 1137 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
NUP50-201ENST00000347635 ANGEL2Q5VTE6 544 aaKnown RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 AP1ARQ63HQ0 302 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 LRRC37BQ96QE4 947 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 EHD4Q9H223 541 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 IL17RBQ9NRM6 502 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 FOXP2O15409 715 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 MYBL1P10243 752 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 RPA1P27694 616 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 LONRF1Q17RB8 773 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 RAPGEF5Q92565 580 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 DBR1Q9UK59 544 aaKnown RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 USP15Q9Y4E8 981 aaPredicted RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 CLGNO14967 610 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms