RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 PABPC5Q96DU9 382 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 RUSC1Q9BVN2 902 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 EIF2AQ9BY44 585 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 NGRNQ9NPE2 291 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 CLDND1Q9NY35 253 aa17.37■□□□□ 0.37
TSPAN4-201ENST00000346501 SCP2P22307 547 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 KCNA5P22460 613 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 CA8P35219 290 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 NPTX2P47972 431 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 RAD51AP2Q09MP3 1159 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 SLC39A14Q15043 492 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 PTPAQ15257 358 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 PUS10Q3MIT2 529 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 GPBP1Q86WP2 473 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 SPRYD3Q8NCJ5 442 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 SMG8Q8ND04 991 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 TMEM175Q9BSA9 504 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 MRPL4Q9BYD3 311 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 IGFLR1Q9H665 355 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 TMEM134Q9H6X4 195 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 TLE6Q9H808 572 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 HCSTQ9UBK5 93 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 ODF2LQ9ULJ1 636 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
TSPAN4-201ENST00000346501 TBCAO75347 108 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 FAM13AO94988 1023 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 POMCP01189 267 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 PLS3P13797 630 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 PLCG1P19174 1290 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 ABCD1P33897 745 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 MLH1P40692 756 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 SLC12A3P55017 1021 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 TFF2Q03403 129 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 BECN1Q14457 450 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 KARSQ15046 597 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 ATF7IP2Q5U623 682 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 CCDC73Q6ZRK6 1079 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 CDR2LQ86X02 465 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 SLC39A11Q8N1S5 342 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 SPIRE2Q8WWL2 714 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 LARP4BQ92615 738 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 GAD1Q99259 594 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 TCF25Q9BQ70 676 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 TCHPQ9BT92 498 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 KIFC3Q9BVG8 833 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 STK17AQ9UEE5 414 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 HES2Q9Y543 173 aa17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 MORC2Q9Y6X9 1032 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-201ENST00000346501 ARL5CA6NH57 179 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 MEIS3P2A8K0S8 358 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 PBX3P40426 434 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 NDUFV1P49821 464 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 SMC1AQ14683 1233 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 ATL3Q6DD88 541 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 RAD54LQ92698 747 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 NXF3Q9H4D5 531 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 ZHX3Q9H4I2 956 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 PDZD7Q9H5P4 517 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 ZMYM2Q9UBW7 1377 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 FBXO2Q9UK22 296 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 CFAP45Q9UL16 551 aa17.34■□□□□ 0.37
TSPAN4-201ENST00000346501 KIAA1671Q9BY89 1806 aa17.33■□□□□ 0.37
TSPAN4-201ENST00000346501 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 SFI1A8K8P3 1242 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 NT5C1B-RDH14C9J2C7 533 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 SPTLC2O15270 562 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 SLC16A4O15374 487 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 YEATS4O95619 227 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 GALTP07902 379 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 AKAP5P24588 427 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 DNAJB1P25685 340 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 DDIT3P35638 169 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 OR1G1P47890 313 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 NRIP1P48552 1158 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 NASPP49321 788 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 YARSP54577 528 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 GRIN1Q05586 938 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 HYAL1Q12794 435 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 GIT2Q14161 759 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 MCM6Q14566 821 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 PLPP4Q5VZY2 271 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 RBM23Q86U06 439 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 IGSF21Q96ID5 467 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 EPSTI1Q96J88 318 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 NTPCRQ9BSD7 190 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 CCDC94Q9BW85 323 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 COLEC11Q9BWP8 271 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms