RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 UBXN11Q5T124 520 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 MRPL43Q8N983 215 aaKnown RBP13.21□□□□□ -0.3
TUBD1-203ENST00000346141 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 VN1R2Q8NFZ6 395 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 IGSF21Q96ID5 467 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-203ENST00000346141 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 KIF3AQ9Y496 699 aa13.21□□□□□ -0.3
TUBD1-203ENST00000346141 USP15Q9Y4E8 981 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-203ENST00000346141 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 NT5C1B-RDH14C9J2C7 533 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 MED24O75448 989 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 GALTP07902 379 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 MUTP22033 750 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 U2AF2P26368 475 aaKnown RBP eCLIP13.2□□□□□ -0.31e-14■■■■□ 24.8
TUBD1-203ENST00000346141 RPA1P27694 616 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
TUBD1-203ENST00000346141 TMEM175Q9BSA9 504 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 LRFN3Q9BTN0 628 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
TUBD1-203ENST00000346141 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
TUBD1-203ENST00000346141 ITGA4P13612 1032 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 HOXB8P17481 243 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-203ENST00000346141 RBM10P98175 930 aaKnown RBP13.19□□□□□ -0.3
TUBD1-203ENST00000346141 GIT2Q14161 759 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 AMHR2Q16671 573 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 ANKRD54Q6NXT1 300 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-203ENST00000346141 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
TUBD1-203ENST00000346141 CASP10Q92851 521 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-203ENST00000346141 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 ZBP1Q9H171 429 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 IPPQ9Y573 584 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 IRAK3Q9Y616 596 aa13.19□□□□□ -0.3
TUBD1-203ENST00000346141 INPPL1O15357 1258 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 CTSAP10619 480 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-203ENST00000346141 CA8P35219 290 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 SLC11A1P49279 550 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 SUSD6Q92537 303 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 CPB2Q96IY4 423 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 PHF7Q9BWX1 381 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-203ENST00000346141 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
TUBD1-203ENST00000346141 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-203ENST00000346141 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
TUBD1-203ENST00000346141 A0A087WWV3 80 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 FAM86C2PA6NEL3 165 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 LAD1O00515 517 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 DDHD2O94830 711 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 CXCL14O95715 111 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 ALDH2P05091 517 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 CYP11B2P19099 503 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 PDIA5Q14554 519 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 MAEAQ7L5Y9 396 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 C4orf32Q8N8J7 132 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 PRMT7Q9NVM4 692 aaPredicted RBP13.17□□□□□ -0.3
TUBD1-203ENST00000346141 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
TUBD1-203ENST00000346141 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 ARL5CA6NH57 179 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 LOC730098B7Z3J9 87 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 B4GALT5O43286 388 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 B4GALT3O60512 393 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 POMCP01189 267 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 CCT6AP40227 531 aaKnown RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 MLH1P40692 756 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 AFF1P51825 1210 aaKnown RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PTGDRQ13258 359 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms