RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 RIN2Q8WYP3 895 aaPredicted RBP6.96□□□□□ -1.29
PCDH18-201ENST00000344876 ATP6V0A4Q9HBG4 840 aa6.96□□□□□ -1.29
PCDH18-201ENST00000344876 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.29
PCDH18-201ENST00000344876 KLHL8Q9P2G9 620 aaPredicted RBP6.96□□□□□ -1.29
PCDH18-201ENST00000344876 MARCOQ9UEW3 520 aaPredicted RBP6.96□□□□□ -1.29
PCDH18-201ENST00000344876 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 LRRC53A6NM62 1247 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 TAF4O00268 1085 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF185O15231 689 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 PTPREP23469 700 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 HSPA2P54652 639 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 MAP3K10Q02779 954 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 MTA1Q13330 715 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DCTN2Q13561 401 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 IMPG1Q17R60 797 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 TAF1BQ53T94 588 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 RUNDC3AQ59EK9 446 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ARMC6Q6NXE6 501 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 RASSF3Q86WH2 238 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ERICH1Q86X53 443 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 THNSL1Q8IYQ7 743 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 NUP93Q8N1F7 819 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 GALNT4Q8N4A0 578 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ZNF579Q8NAF0 562 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 GANCQ8TET4 914 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 THAP11Q96EK4 314 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 IRX2Q9BZI1 471 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 FOXP1Q9H334 677 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CAAP1Q9H8G2 361 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CSADQ9Y600 493 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 YTHDC2Q9H6S0 1430 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 F8W810 466 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 PIK3R2O00459 728 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CTIFO43310 598 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 SNX2O60749 519 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 KRT37O76014 449 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 MMP1P03956 469 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 UBTFL6P0CB48 400 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 OCM2P0CE71 109 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 OCMP0CE72 109 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CD53P19397 219 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 KCNQ4P56696 695 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 COPS2P61201 443 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DRP2Q13474 957 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 TCIRG1Q13488 830 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 EFTUD2Q15029 972 aaKnown RBP eCLIP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 PROSER3Q2NL68 480 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 EMBQ6PCB8 327 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ACAD11Q709F0 780 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 C11orf74Q86VG3 221 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ARHGEF25Q86VW2 580 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ZBED8Q8IZ13 594 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 KIF2BQ8N4N8 673 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ZBTB18Q99592 522 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 TRIM15Q9C019 465 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 NEUROG2Q9H2A3 272 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 SYBUQ9NX95 663 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 EHD2Q9NZN4 543 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 STK17AQ9UEE5 414 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CNOT8Q9UFF9 292 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 NOC2LQ9Y3T9 749 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ABCC1P33527 1531 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DDAH1O94760 285 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 CCNE1P24864 410 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 LVRNQ6Q4G3 990 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 TMC4Q7Z404 712 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DDIASQ8IXT1 998 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ABI1Q8IZP0 508 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 OR6B3Q8NGW1 331 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 ABHD8Q96I13 439 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DMAP1Q9NPF5 467 aaPredicted RBP6.96□□□□□ -1.3
PCDH18-201ENST00000344876 KLHL11Q9NVR0 708 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 DNAJC12Q9UKB3 198 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 V9GYQ6 96 aa6.96□□□□□ -1.3
PCDH18-201ENST00000344876 USP17L8P0C7I0 530 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 GCLMP48507 274 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 MTTPP55157 894 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 PEX3P56589 373 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 SLC20A2Q08357 652 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 MXD4Q14582 209 aaPredicted RBP6.95□□□□□ -1.3
PCDH18-201ENST00000344876 MTF1Q14872 753 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 NCAPHQ15003 741 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
PCDH18-201ENST00000344876 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 TCP11X1B4DZS4 312 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 DNALI1O14645 258 aaPredicted RBP6.95□□□□□ -1.3
PCDH18-201ENST00000344876 TEX33O43247 280 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 CALB1P05937 261 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 PRR29P0C7W0 189 aa6.95□□□□□ -1.3
PCDH18-201ENST00000344876 AARSP49588 968 aaKnown RBP eCLIP6.95□□□□□ -1.3
PCDH18-201ENST00000344876 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
PCDH18-201ENST00000344876 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms