RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 L3MBTL1Q9Y468 752 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 PPM1FP49593 454 aaPredicted RBP19.17■□□□□ 0.66
SMC4-201ENST00000344722 VAMP7P51809 220 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 STK33Q9BYT3 514 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 CELF4Q9BZC1 486 aaKnown RBP19.17■□□□□ 0.66
SMC4-201ENST00000344722 CCNL1Q9UK58 526 aaPredicted RBP19.17■□□□□ 0.66
SMC4-201ENST00000344722 TFR2Q9UP52 801 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 KLRC1P26715 233 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 UBXN2AP68543 259 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 EFTUD2Q15029 972 aaKnown RBP eCLIP19.17■□□□□ 0.661e-7■■□□□ 12.6
SMC4-201ENST00000344722 TMEM35BQ8NCS4 154 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 SLC13A1Q9BZW2 595 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 VPS11Q9H270 941 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 ASAP2O43150 1006 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 SKOR1P84550 965 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 PDIA5Q14554 519 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 LRRC36Q1X8D7 754 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
SMC4-201ENST00000344722 PLAGL2Q9UPG8 496 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 NRKQ7Z2Y5 1582 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 POTEB3A0JP26 581 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 B2RBV5 119 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 POTECB2RU33 542 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 UCHL3P15374 230 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 SURF1Q15526 300 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 POTEBQ6S5H4 581 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 USP49Q70CQ1 688 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 CEP170P1Q96L14 293 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 C11orf70Q9BRQ4 267 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 THTPAQ9BU02 230 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 DCLRE1BQ9H816 532 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 WDR17Q8IZU2 1322 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 KLK7P49862 253 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 MAPRE2Q15555 327 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 TRIP10Q15642 601 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
SMC4-201ENST00000344722 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 TMEM47Q9BQJ4 181 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
SMC4-201ENST00000344722 UVRAGQ9P2Y5 699 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 STRIP2Q9ULQ0 834 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 ARHGEF9O43307 516 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 CD58P19256 250 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 SPDYE1Q8NFV5 336 aaPredicted RBP19.16■□□□□ 0.66
SMC4-201ENST00000344722 STX18Q9P2W9 335 aaKnown RBP19.16■□□□□ 0.66
SMC4-201ENST00000344722 QRICH2Q9H0J4 1663 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 SYNJ2BP-COX16A0A087WUM0 186 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 ERVV-1B6SEH8 477 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 CHEK2O96017 543 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 TARSP26639 723 aaKnown RBP19.16■□□□□ 0.66
SMC4-201ENST00000344722 ZCWPW2Q504Y3 356 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 RHBDL2Q9NX52 303 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 COX16Q9P0S2 106 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 C15orf41Q9Y2V0 281 aa19.16■□□□□ 0.66
SMC4-201ENST00000344722 KLHL2O95198 593 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 TMEM253P0C7T8 217 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 HERVK_113P62684 666 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 PTPAQ15257 358 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 RCN1Q15293 331 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SYDE2Q5VT97 1194 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 MAGEB18Q96M61 343 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 FAM20AQ96MK3 541 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 CRB1P82279 1406 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 DEAF1O75398 565 aaPredicted RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 TFDP1Q14186 410 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 TRIM72Q6ZMU5 477 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 YTHDF3Q7Z739 585 aaKnown RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 C4orf33Q8N1A6 199 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 METTL13Q8N6R0 699 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 DHX38Q92620 1227 aaKnown RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 OSBPL8Q9BZF1 889 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SERPINB13Q9UIV8 391 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 ARHGAP26Q9UNA1 814 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 TLR3O15455 904 aaKnown RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 KRT7P08729 469 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SERPINB10P48595 397 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 ENOSF1Q7L5Y1 443 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 KIRREL3Q8IZU9 778 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SLC7A3Q8WY07 619 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 ZKSCAN4Q969J2 545 aaPredicted RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 TSC22D4Q9Y3Q8 395 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 GLI2P10070 1586 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 XDHP47989 1333 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 FAM205CA6NFA0 338 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 STK4Q13043 487 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 TBCCQ15814 346 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SWT1Q5T5J6 900 aaKnown RBP19.15■□□□□ 0.66
SMC4-201ENST00000344722 FAM160B1Q5W0V3 765 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 KIAA2013Q8IYS2 634 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SUN2Q9UH99 717 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 SUPT3HO75486 399 aa19.15■□□□□ 0.66
SMC4-201ENST00000344722 ANTXR2P58335 489 aa19.14■□□□□ 0.66
SMC4-201ENST00000344722 P3H1Q32P28 736 aa19.14■□□□□ 0.66
SMC4-201ENST00000344722 PREPLQ4J6C6 727 aaPredicted RBP19.14■□□□□ 0.66
SMC4-201ENST00000344722 CARD9Q9H257 536 aa19.14■□□□□ 0.66
SMC4-201ENST00000344722 CACYBPQ9HB71 228 aaKnown RBP19.14■□□□□ 0.66
SMC4-201ENST00000344722 ASNSD1Q9NWL6 643 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms