RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TTLL3Q9Y4R7 772 aa13.35□□□□□ -0.27
SSX2IP-201ENST00000342203 SLC37A4O43826 429 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 GDF11O95390 407 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 NME8Q8N427 588 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 ACTRT1Q8TDG2 376 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 IWS1Q96ST2 819 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 ZWILCHQ9H900 591 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 PIK3CAP42336 1068 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 CASP7P55210 303 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 ARHGAP4P98171 946 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 EPC2Q52LR7 807 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 TEX9Q8N6V9 391 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 B2RBV5 119 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 SERPINB3P29508 390 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 AP2B1P63010 937 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 DDR1Q08345 913 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 NSUN4Q96CB9 384 aaKnown RBP13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 HIC2Q96JB3 615 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 REEP2Q9BRK0 252 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 TEKT3Q9BXF9 490 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 STAM2O75886 525 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 KRT80Q6KB66 452 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 SMYD2Q9NRG4 433 aa13.34□□□□□ -0.27
SSX2IP-201ENST00000342203 CCDC22O60826 627 aa13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 PEX3P56589 373 aa13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 STAT4Q14765 748 aa13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 PHTF1Q9UMS5 762 aa13.33□□□□□ -0.27
SSX2IP-201ENST00000342203 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 POLR2MP0CAP2 368 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 RFC5P40937 340 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 KRT81Q14533 505 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 RNF8O76064 485 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 DRD4P21917 467 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 ARSEP51690 589 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 AOC3Q16853 763 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 P3H1Q32P28 736 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 LVRNQ6Q4G3 990 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 BZW1Q7L1Q6 419 aaKnown RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 SPATA20Q8TB22 786 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 MTRQ99707 1265 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 STK33Q9BYT3 514 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 SALL4Q9UJQ4 1053 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 LPXNO60711 386 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 CBX6O95503 412 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 VHLP40337 213 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 SHCBP1LQ9BZQ2 653 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 ALDH18A1P54886 795 aaKnown RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
SSX2IP-201ENST00000342203 H3BRJ5 948 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 PON1P27169 355 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 EPHB2P29323 1055 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 FMO5P49326 533 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 NR1H3Q13133 447 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 PDIA5Q14554 519 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 AADACL2Q6P093 401 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 TRIM56Q9BRZ2 755 aaKnown RBP13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 FIS1Q9Y3D6 152 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 TMEM253P0C7T8 217 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 ATL2Q8NHH9 583 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 MRPL47Q9HD33 250 aaKnown RBP13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 PDXKO00764 312 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 ASAP2O43150 1006 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 ATXN3P54252 364 aaPredicted RBP13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 CACNB3P54284 484 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 DARS2Q6PI48 645 aaKnown RBP13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 SIK3Q9Y2K2 1263 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 LMTK2Q8IWU2 1503 aa13.32□□□□□ -0.28
SSX2IP-201ENST00000342203 A8MUI8 341 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms