RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.21
BRAT1-201ENST00000340611 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.21
BRAT1-201ENST00000340611 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-201ENST00000340611 TBCAO75347 108 aaKnown RBP16.33■□□□□ 0.2
BRAT1-201ENST00000340611 ATP4AP20648 1035 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 PSMC5P62195 406 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 CAPRIN2Q6IMN6 1127 aaKnown RBP16.33■□□□□ 0.2
BRAT1-201ENST00000340611 ZNF746Q6NUN9 644 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-201ENST00000340611 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 FAM210AQ96ND0 272 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 MLXIPQ9HAP2 919 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 SEPT9Q9UHD8 586 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-201ENST00000340611 BAIAP2L1Q9UHR4 511 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
BRAT1-201ENST00000340611 CLSTN1O94985 981 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 FAM13AO94988 1023 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 GCNT3O95395 438 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 RAB27AP51159 221 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 JAK3P52333 1124 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 SLC7A5Q01650 507 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 ZNF792Q3KQV3 632 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 TARSL2A2RTX5 802 aaKnown RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 CTGFP29279 349 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 HOXD13P35453 343 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 ADCYAP1R1P41586 468 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 PRKCEQ02156 737 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 CCL14Q16627 93 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 NAA35Q5VZE5 725 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 SHCBP1Q8NEM2 672 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 NSMCE1Q8WV22 266 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 LENG1Q96BZ8 264 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 ARHGAP39Q9C0H5 1083 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 DMGDHQ9UI17 866 aaKnown RBP16.32■□□□□ 0.2
BRAT1-201ENST00000340611 MAFGO15525 162 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 KRT86O43790 486 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 CCNE1P24864 410 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 RANBP1P43487 201 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.28e-8■■■■□ 20.8
BRAT1-201ENST00000340611 SPRED3Q2MJR0 410 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 MICALCLQ6ZW33 695 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 MYOCDQ8IZQ8 938 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 CDHR1Q96JP9 859 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 PCYT2Q99447 389 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
BRAT1-201ENST00000340611 B4DLN1 442 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 ECEL1O95672 775 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
BRAT1-201ENST00000340611 APBA1Q02410 837 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 MAPK7Q13164 816 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 STAMBPL1Q96FJ0 436 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 STBD1O95210 358 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 PSAPP07602 524 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 CYP2B6P20813 491 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 SFNP31947 248 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 ICAM3P32942 547 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 ODR4Q5SWX8 454 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
BRAT1-201ENST00000340611 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 FLRT1Q9NZU1 646 aa16.31■□□□□ 0.2
BRAT1-201ENST00000340611 LGALS16A8MUM7 142 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 TISP43B9A030 160 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 BUB1BO60566 1050 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 STAM2O75886 525 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 TRIM21P19474 475 aaKnown RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 KRT83P78385 493 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 CDCA2Q69YH5 1023 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 KLHL23Q8NBE8 558 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 USP20Q9Y2K6 914 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 CLIC2O15247 247 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 ADCY6O43306 1168 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 CAP1Q01518 475 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 NHEJ1Q9H9Q4 299 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-201ENST00000340611 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 CAPN11Q9UMQ6 739 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
BRAT1-201ENST00000340611 NFASCO94856 1347 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms