RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CEP89Q96ST8 783 aa11□□□□□ -0.65
RBFOX1-202ENST00000340209 DMGDHQ9UI17 866 aaKnown RBP11□□□□□ -0.65
RBFOX1-202ENST00000340209 GRID2IPA4D2P6 1211 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 SMC1AQ14683 1233 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DPP9Q86TI2 863 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 MCPH1Q8NEM0 835 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 KIFAP3Q92845 792 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DBR1Q9UK59 544 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 USTQ9Y2C2 406 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 LTBP3Q9NS15 1303 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 FTLP02792 175 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 FDX1P10109 184 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 ORC1Q13415 861 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 SPATA4Q8NEY3 305 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 NT5C1BQ96P26 610 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 KCND2Q9NZV8 630 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 PFASO15067 1338 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 IGSF9BQ9UPX0 1349 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 MYBL2P10244 700 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 CFAP221Q4G0U5 840 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DAB2IPQ5VWQ8 1189 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 B3GNT9Q6UX72 402 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 SMAP1Q8IYB5 467 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 PRPF31Q8WWY3 499 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 FAM49AQ9H0Q0 323 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DDX47Q9H0S4 455 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 DPH5Q9H2P9 285 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 AGO2Q9UKV8 859 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 SPOPO43791 374 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 TBC1D8O95759 1140 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 MMEP08473 750 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 AADACL2Q6P093 401 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 NIPA1Q7RTP0 329 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 C1orf112Q9NSG2 853 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 ANKEF1Q9NU02 776 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 RBAKQ9NYW8 714 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 NXF1Q9UBU9 619 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
RBFOX1-202ENST00000340209 SSC5DA1L4H1 1573 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 CCL15-CCL14A0A0B4J2E2 113 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 ZNF233A6NK53 670 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 DKC1O60832 514 aaKnown RBP eCLIP10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 TCP1P17987 556 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 OSBPP22059 807 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 CCL15Q16663 113 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 WDR44Q5JSH3 913 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 ABHD15Q6UXT9 468 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 GOLGA6L1Q8N7Z2 621 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 CHST13Q8NET6 341 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 SLC35G2Q8TBE7 412 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 ZNF653Q96CK0 615 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 IWS1Q96ST2 819 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 NRBP2Q9NSY0 501 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 AIPL1Q9NZN9 384 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 HNRNPH3P31942 346 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 NAB2Q15742 525 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 KRT39Q6A163 491 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 RUFY1Q96T51 708 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 EPB41L5Q9HCM4 733 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 SPATA31C2B4DYI2 1134 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 SLC26A4O43511 780 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 HEXIM1O94992 359 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 ATP4AP20648 1035 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 GLRA2P23416 452 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 TNFSF9P41273 254 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 CDK17Q00537 523 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 CPA5Q8WXQ8 436 aa10.98□□□□□ -0.65
RBFOX1-202ENST00000340209 BUB1BO60566 1050 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 FGFR4P22455 802 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 PLA2G4AP47712 749 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 PDE6CP51160 858 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 GPS2Q13227 327 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 TRADDQ15628 312 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 FAM160B1Q5W0V3 765 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 PAPD7Q5XG87 772 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 TMEM270Q6UE05 265 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 DDX42Q86XP3 938 aaKnown RBP eCLIP10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 CEP120Q8N960 986 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 APOL6Q9BWW8 343 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 EDEM3Q9BZQ6 932 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 PCDHB4Q9Y5E5 795 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 KRIT1O00522 736 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 CLDN3O15551 220 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 CCDC172P0C7W6 258 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 LMAN1P49257 510 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 WNT7BP56706 349 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 GTF2BQ00403 316 aa10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 ASTE1Q2TB18 679 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-202ENST00000340209 FBXL13Q8NEE6 735 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms