RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MNS1Q8NEH6 495 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 AFG1LQ8WV93 481 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 SECISBP2LQ93073 1101 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 STK33Q9BYT3 514 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 HDAC6Q9UBN7 1215 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 KCNG1Q9UIX4 513 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 MYO6Q9UM54 1294 aa24.35■■□□□ 1.49
PDLIM2-203ENST00000339162 STAT1P42224 750 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 IGBP1P78318 339 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 CYP24A1Q07973 514 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 CETN1Q12798 172 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 ERCC6LQ2NKX8 1250 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 MFSD14AQ96MC6 490 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 PACSIN1Q9BY11 444 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 TSGA10Q9BZW7 698 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 UBE2TQ9NPD8 197 aaPredicted RBP24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 CAPN6Q9Y6Q1 641 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 ADCY3O60266 1144 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 EVI5O60447 810 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 MOCS3O95396 460 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 GH1P01241 217 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 SOX5P35711 763 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 LAMTOR4Q0VGL1 99 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 LAMC2Q13753 1193 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 ELF2Q15723 593 aa24.34■■□□□ 1.49
PDLIM2-203ENST00000339162 FAM170AA1A519 330 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 N4BP1O75113 896 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 ATP1A1P05023 1023 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 ZNF286BP0CG31 522 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 MATR3P43243 847 aaKnown RBP eCLIP24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 NLRP11P59045 1033 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 RHPN2Q8IUC4 686 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 METTL13Q8N6R0 699 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 RNF149Q8NC42 400 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 SEMA4DQ92854 862 aa24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 ZHX1Q9UKY1 873 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-203ENST00000339162 LGALS2P05162 132 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 HARSP12081 509 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 MAPK4P31152 587 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 WNT7BP56706 349 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 SEZ6Q53EL9 994 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 ZBTB41Q5SVQ8 909 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 IER5Q5VY09 327 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 LMBRD2Q68DH5 695 aaPredicted RBP24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 ZNF467Q7Z7K2 595 aaPredicted RBP24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 KAT5Q92993 513 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 TINF2Q9BSI4 451 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 ERAP1Q9NZ08 941 aa24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 AGO2Q9UKV8 859 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-203ENST00000339162 BUB1O43683 1085 aa24.32■■□□□ 1.48
PDLIM2-203ENST00000339162 PRKCIP41743 596 aa24.32■■□□□ 1.48
PDLIM2-203ENST00000339162 CLCN3P51790 818 aa24.32■■□□□ 1.48
PDLIM2-203ENST00000339162 PSPC1Q8WXF1 523 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-203ENST00000339162 BZW2Q9Y6E2 419 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-203ENST00000339162 IGKV6-21A0A0C4DH24 114 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 ZNF233A6NK53 670 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 FOXN3O00409 490 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 P4HA2O15460 535 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 ABCD1P33897 745 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 SLC26A2P50443 739 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 TAF1CQ15572 869 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 KRT39Q6A163 491 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 SAPCD2Q86UD0 394 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 SUCLA2Q9P2R7 463 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 CDC23Q9UJX2 597 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 CENPFP49454 3210 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 RBM47A0AV96 593 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 EXTL3O43909 919 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 HBP1O60381 514 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 FERP16591 822 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 SMPD1P17405 629 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 PRAMEF19Q5SWL8 479 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 EFCAB12Q6NXP0 572 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 TAS1R2Q8TE23 839 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 STYXL1Q9Y6J8 313 aa24.31■■□□□ 1.48
PDLIM2-203ENST00000339162 PJA2O43164 708 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 ADCY6O43306 1168 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 INSRRP14616 1297 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 KIAA0753Q2KHM9 967 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 TMC2Q8TDI7 906 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 TCP11Q8WWU5 503 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 NLRP4Q96MN2 994 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 MSTO1Q9BUK6 570 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 TMEM134Q9H6X4 195 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 PUF60Q9UHX1 559 aaKnown RBP24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 ACVR2BQ13705 512 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 CRELD2Q6UXH1 353 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 SV2AQ7L0J3 742 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 PPTC7Q8NI37 304 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 TMEM8AQ9HCN3 771 aa24.3■■□□□ 1.48
PDLIM2-203ENST00000339162 SRGAP2O75044 1071 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 PIGRP01833 764 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 NAP1L1P55209 391 aaKnown RBP24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 AMPD2Q01433 879 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 ANKRD7Q92527 254 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 ZNF516Q92618 1163 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 PDE11AQ9HCR9 933 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 NAGPAQ9UK23 515 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 PPME1Q9Y570 386 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 TADA3O75528 432 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms