RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PRKCIP41743 596 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 CKAP4Q07065 602 aaKnown RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 CCL14Q16627 93 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 KIAA0753Q2KHM9 967 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 C10orf76Q5T2E6 689 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 ARMCX2Q7L311 632 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 CAGE1Q8TC20 777 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 RAET1EQ8TD07 263 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 TRIB2Q92519 343 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 KIFC3Q9BVG8 833 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 CYP26B1Q9NR63 512 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 APEX2Q9UBZ4 518 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 TELO2Q9Y4R8 837 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 IGSF9BQ9UPX0 1349 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 N4BP1O75113 896 aaKnown RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 FERP16591 822 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 ANXA13P27216 316 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 STAT1P42224 750 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 VAMP7P51809 220 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 SP2Q02086 613 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 XKR3Q5GH77 459 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 ZNF571Q7Z3V5 609 aaPredicted RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 FMNL3Q8IVF7 1028 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 CAPZA3Q96KX2 299 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 KATNBL1Q9H079 304 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 ATP6V0A4Q9HBG4 840 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 AJAP1Q9UKB5 411 aaPredicted RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 LCTP09848 1927 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 F8VZ95 297 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 MAPK13O15264 365 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 BUB1O43683 1085 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 ADCY3O60266 1144 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 STBD1O95210 358 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 RFX1P22670 979 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 RPGRIP1Q96KN7 1286 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 NTPCRQ9BSD7 190 aaKnown RBP12.02□□□□□ -0.48
LRP1-202ENST00000338962 STK33Q9BYT3 514 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 ZNF446Q9NWS9 450 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.48
LRP1-202ENST00000338962 SALL4Q9UJQ4 1053 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 DNAJC12Q9UKB3 198 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 SNX12Q9UMY4 172 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 DAAM1Q9Y4D1 1078 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 PTCH2Q9Y6C5 1203 aa12.02□□□□□ -0.48
LRP1-202ENST00000338962 EMSYQ7Z589 1322 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 DOCK5Q9H7D0 1870 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 EVI5O60447 810 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 GFPT2O94808 682 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 CNGA1P29973 690 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 SOX5P35711 763 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 POLGP54098 1239 aaPredicted RBP12.02□□□□□ -0.49
LRP1-202ENST00000338962 SOX10P56693 466 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 RTP1P59025 263 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 DLG4P78352 724 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 NAB2Q15742 525 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 MTERF2Q49AM1 385 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 BSNDQ8WZ55 320 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 IFT74Q96LB3 600 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 ZNF302Q9NR11 478 aa12.02□□□□□ -0.49
LRP1-202ENST00000338962 HNRNPDLO14979 420 aaKnown RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 P4HA2O15460 535 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 HMGCRP04035 888 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 CCDC172P0C7W6 258 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 GRK4P32298 578 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 ABCD1P33897 745 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 GCLMP48507 274 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 DRAP1Q14919 205 aaPredicted RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 SNRNP35Q16560 246 aaKnown RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 MFSD14CQ5VZR4 134 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 ALKBH5Q6P6C2 394 aaKnown RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 FBXO46Q6PJ61 603 aaPredicted RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 NOA1Q8NC60 698 aaKnown RBP12.01□□□□□ -0.49
LRP1-202ENST00000338962 MMS19Q96T76 1030 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 PACSIN1Q9BY11 444 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 ANKZF1Q9H8Y5 726 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 XPNPEP1Q9NQW7 623 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 NAGPAQ9UK23 515 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 DOCK3Q8IZD9 2030 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 PLXNB2O15031 1838 aa12.01□□□□□ -0.49
LRP1-202ENST00000338962 HTTP42858 3142 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms