RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TNIP1Q15025 636 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 KIF2BQ8N4N8 673 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SYT2Q8N9I0 419 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 EIF2AK1Q9BQI3 630 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 FSBPO95073 299 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 HADHBP55084 474 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 RBBP5Q15291 538 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 GPATCH4Q5T3I0 446 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SWT1Q5T5J6 900 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 NT5DC3Q86UY8 548 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 KRT35Q92764 455 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 WDR90Q96KV7 1748 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 RAB17Q9H0T7 212 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 BZW2Q9Y6E2 419 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 FOXN3O00409 490 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 GAS7O60861 476 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SMIM24O75264 130 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 PSMC2P35998 433 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 PMS2P54278 862 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 ATP11AP98196 1134 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 MYL7Q01449 175 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 MTM1Q13496 603 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 CBWD6Q4V339 395 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 CBWD3Q5JTY5 395 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 CBWD5Q5RIA9 395 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 SEPT14Q6ZU15 432 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 TMC3Q7Z5M5 1100 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 CCDC197Q8NCU1 140 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.675e-8■■■■■ 65.3
HIF1A-202ENST00000337138 ZKSCAN4Q969J2 545 aaPredicted RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 RBM17Q96I25 401 aaKnown RBP10.88□□□□□ -0.67
HIF1A-202ENST00000337138 HSD17B14Q9BPX1 270 aa10.88□□□□□ -0.67
HIF1A-202ENST00000337138 GTPBP10A4D1E9 387 aaKnown RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 F5H6K3 240 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 KRT5P13647 590 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FERP16591 822 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 KLRC3Q07444 240 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CYB5D1Q6P9G0 228 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FRMD5Q7Z6J6 570 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SLFN12Q8IYM2 578 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 KAT5Q92993 513 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SAAL1Q96ER3 474 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 HEMGNQ9BXL5 484 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 RASAL2Q9UJF2 1139 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SUGT1Q9Y2Z0 365 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ANKRD62A6NC57 917 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 K7ENM7 598 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CYP3A4P08684 503 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 GCFC2P16383 781 aaKnown RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SIX1Q15475 284 aaPredicted RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SEPT7Q16181 437 aaKnown RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 KIAA1755Q5JYT7 1200 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 HOOK3Q86VS8 718 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 LRRC34Q8IZ02 419 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CPXCR1Q8N123 301 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ZBTB10Q96DT7 871 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 MTRF1LQ9UGC7 380 aaKnown RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ARHGEF35A5YM69 484 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 F8VZ95 297 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 RASSF9O75901 435 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 GH2P01242 217 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ALAS1P13196 640 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 NPEPPSP55786 919 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CALCOCO2Q13137 446 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 GRIPAP1Q4V328 841 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 SEL1L2Q5TEA6 688 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CD101Q93033 1021 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 CHMP6Q96FZ7 201 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 DEFB129Q9H1M3 183 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 FAM114A2Q9NRY5 505 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 TYW1Q9NV66 732 aaKnown RBP10.87□□□□□ -0.67
HIF1A-202ENST00000337138 COG5Q9UP83 839 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 ALG6Q9Y672 507 aa10.87□□□□□ -0.67
HIF1A-202ENST00000337138 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 MSH4O15457 936 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
HIF1A-202ENST00000337138 SOX5P35711 763 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 MXRA7P84157 204 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 CDC42EP5Q6NZY7 148 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 ZDHHC24Q6UX98 284 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 JAMLQ86YT9 394 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 ALG3Q92685 438 aa10.86□□□□□ -0.67
HIF1A-202ENST00000337138 TEKT1Q969V4 418 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms