RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ARHGAP44Q17R89 818 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 DUPD1Q68J44 220 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 KRT39Q6A163 491 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TMC3Q7Z5M5 1100 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CROCCP2Q86T23 111 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TMEM161BQ8NDZ6 487 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 THAP2Q9H0W7 228 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ZNF277Q9NRM2 450 aaPredicted RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 UVRAGQ9P2Y5 699 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PCYOX1Q9UHG3 505 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 FEZ2Q9UHY8 353 aaPredicted RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 GTF3C4Q9UKN8 822 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TBX20Q9UMR3 447 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 DDX39AO00148 427 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 EBAG9O00559 213 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 BACH1O14867 736 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 KIAA0391O15091 583 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PHF2O75151 1096 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CYP1A2P05177 515 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ADRB2P07550 413 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MYZAPP0CAP1 466 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ITGA4P13612 1032 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 GARTP22102 1010 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RXRBP28702 533 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RNASE9P60153 205 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 B4GALNT4Q76KP1 1039 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 OTUD6AQ7L8S5 288 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PLEKHO2Q8TD55 490 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 DHX38Q92620 1227 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CD101Q93033 1021 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ZSWIM1Q9BR11 485 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ERP44Q9BS26 406 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MOV10L1Q9BXT6 1211 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RASSF4Q9H2L5 321 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 TAS2R14Q9NYV8 317 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 COG5Q9UP83 839 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 SAMM50Q9Y512 469 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 WDR90Q96KV7 1748 aa11.58□□□□□ -0.55
CCDC172-201ENST00000333254 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 PODXLO00592 558 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 ATP2A1O14983 1001 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 TTI1O43156 1089 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 ERLIN2O94905 339 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 CPP00450 1065 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 PAEPP09466 180 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 NUDT17P0C025 328 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 CHRNB2P17787 502 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 ABCB4P21439 1286 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 CCND2P30279 289 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 GCLMP48507 274 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 DR1Q01658 176 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 GCNT1Q02742 428 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 DMP1Q13316 513 aaPredicted RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 TRADDQ15628 312 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 SNRNP35Q16560 246 aaKnown RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 UGCGQ16739 394 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 NBPF9Q3BBW0 867 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 CEP85LQ5SZL2 805 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 NLRX1Q86UT6 975 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 VSIG10LQ86VR7 867 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 C12orf50Q8NA57 414 aaPredicted RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 MCPH1Q8NEM0 835 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 BCAS4Q8TDM0 211 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 CDHR1Q96JP9 859 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 RMDN3Q96TC7 470 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 EPN3Q9H201 632 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 NEUROG2Q9H2A3 272 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 PDLIM7Q9NR12 457 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
CCDC172-201ENST00000333254 ADAMTS5Q9UNA0 930 aa11.58□□□□□ -0.56
CCDC172-201ENST00000333254 PCDHA10Q9Y5I2 948 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms