RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 AADACL2Q6P093 401 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 PRELID2Q8N945 189 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 NEDD1Q8NHV4 660 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 CKAP2Q8WWK9 683 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 ARHGEF2Q92974 986 aaKnown RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 UTP4Q969X6 686 aaKnown RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 NT5C3AQ9H0P0 336 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 PFASO15067 1338 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 PODXLO00592 558 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 CREB1P16220 341 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 CYP11B2P19099 503 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 LMNB1P20700 586 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 GABPAQ06546 454 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 MGAT5Q09328 741 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 LONRF1Q17RB8 773 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 TTC27Q6P3X3 843 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 ANKRD42Q8N9B4 389 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 ANKLE1Q8NAG6 615 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 ARHGEF26Q96DR7 871 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 ZHX3Q9H4I2 956 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 MLXIPLQ9NP71 852 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 PCYOX1Q9UHG3 505 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 KIAA1024Q9UPX6 916 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 TRAF3IP3Q9Y228 551 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 PCDHAC2Q9Y5I4 1007 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 DPPA5A6NC42 116 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 UPP2O95045 317 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 UNC5CO95185 931 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 STAT1P42224 750 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 TNNI2P48788 182 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 RAB27AP51159 221 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 NFIAQ12857 509 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 TCERG1LQ5VWI1 586 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 ANO7Q6IWH7 933 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 CGB2Q6NT52 195 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 SLC30A9Q6PML9 568 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 RUNDC3BQ96NL0 473 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 CPSF2Q9P2I0 782 aaKnown RBP19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 DDX25Q9UHL0 483 aaKnown RBP19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 LRRC42Q9Y546 428 aa19.45■□□□□ 0.7
CLSTN3-202ENST00000331148 HGSO14964 777 aaPredicted RBP19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 AKAP3O75969 853 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 ALAS1P13196 640 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 HSPA6P17066 643 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 SMARCA1P28370 1054 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 RNF43Q68DV7 783 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 FBF1Q8TES7 1133 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 UBA5Q9GZZ9 404 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 RNPEPL1Q9HAU8 725 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 ETNK1Q9HBU6 452 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 SERPINB13Q9UIV8 391 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 SYNGAP1Q96PV0 1343 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 ANKRD63C9JTQ0 380 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 MPHOSPH10O00566 681 aaKnown RBP19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 KRT18P05783 430 aaKnown RBP19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 HLA-DOAP06340 250 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 CCDC15Q0P6D6 951 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 RSBN1LQ6PCB5 846 aaPredicted RBP19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 GDAP1Q8TB36 358 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 ART4Q93070 314 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 COA7Q96BR5 231 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 IDI2Q9BXS1 227 aa19.44■□□□□ 0.7
CLSTN3-202ENST00000331148 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 POTEB3A0JP26 581 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 POTECB2RU33 542 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 hCG_1984214I3L0E3 225 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 RAD17O75943 681 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 VIL1P09327 827 aaKnown RBP19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 CTNNA2P26232 953 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 MKRN3Q13064 507 aaKnown RBP19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 POTEBQ6S5H4 581 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 ZNF713Q8N859 430 aaPredicted RBP19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 SLC35C1Q96A29 364 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 TGS1Q96RS0 853 aaKnown RBP19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 TSC22D3Q99576 134 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 KLHL14Q9P2G3 628 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 COG5Q9UP83 839 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 PSME4Q14997 1843 aa19.43■□□□□ 0.7
CLSTN3-202ENST00000331148 E7ENQ6 273 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 SOX5P35711 763 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 KNOP1Q1ED39 458 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 CCDC25Q86WR0 208 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ECHDC2Q86YB7 292 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 SERPINB12Q96P63 405 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 DDX23Q9BUQ8 820 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 KCNK9Q9NPC2 374 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 TXLNGQ9NUQ3 528 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ZNRF3Q9ULT6 936 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ZMYND8Q9ULU4 1186 aaPredicted RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 FAM170AA1A519 330 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ABLIM1O14639 778 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 MARCH6O60337 910 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 PEX11AO75192 247 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 GH1P01241 217 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 CALB2P22676 271 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 HOXD13P35453 343 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms