RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 POLE2P56282 527 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 GRIN1Q05586 938 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 DCAF4L1Q3SXM0 396 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 KRT39Q6A163 491 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 ANGPTL8Q6UXH0 198 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 FBXO28Q9NVF7 368 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 EYA4O95677 639 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.83□□□□□ -0.682e-6■■■■■ 54.9
CHD3-201ENST00000330494 TTC1Q99614 292 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 CDR2LQ86X02 465 aaPredicted RBP10.83□□□□□ -0.68
CHD3-201ENST00000330494 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 FGD4Q96M96 766 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 SPON2Q9BUD6 331 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 MYMKA6NI61 221 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 SPECC1L-ADORA2AF8WAN1 911 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 GRAP2O75791 330 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 DUOXA2Q1HG44 320 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 SZRD1Q7Z422 152 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 SLC13A1Q9BZW2 595 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 PIDD1Q9HB75 910 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
CHD3-201ENST00000330494 CCDC78A2IDD5 438 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 GNGT2O14610 69 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 SARM1Q6SZW1 724 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 EFCAB13Q8IY85 973 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 ELMOD1Q8N336 334 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 TTC25Q96NG3 672 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 PI4K2AQ9BTU6 479 aa10.83□□□□□ -0.68
CHD3-201ENST00000330494 STMN1P16949 149 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 APBA1Q02410 837 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 EPHA7Q15375 998 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 KIF19Q2TAC6 998 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 ELAC2Q9BQ52 826 aaKnown RBP10.82□□□□□ -0.68
CHD3-201ENST00000330494 IRX2Q9BZI1 471 aaPredicted RBP10.82□□□□□ -0.68
CHD3-201ENST00000330494 DEFB129Q9H1M3 183 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 BCAP29Q9UHQ4 241 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SLC8A2Q9UPR5 921 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 GSTA4O15217 222 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 FAM118BQ9BPY3 351 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 VPS11Q9H270 941 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 HPCAL4Q9UM19 191 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 AGAP1Q9UPQ3 857 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SLC10A5Q5PT55 438 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 PPP1R2P3Q6NXS1 205 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 FAM47EQ6ZV65 393 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 CCHCR1Q8TD31 782 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 POLLQ9UGP5 575 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 AFF4Q9UHB7 1163 aaKnown RBP10.82□□□□□ -0.68
CHD3-201ENST00000330494 SUGT1Q9Y2Z0 365 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SYNGAP1Q96PV0 1343 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 A0A0G2JND7 137 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 CALB1P05937 261 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 MX2P20592 715 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SDC4P31431 198 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 POU5F1BQ06416 359 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 ART3Q13508 389 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SEZ6Q53EL9 994 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 NUGGCQ68CJ6 796 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 FRA10AC1Q70Z53 315 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 FBXO33Q7Z6M2 555 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 JMJD4Q9H9V9 463 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 DLC1Q96QB1 1528 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SPAG7O75391 227 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 SH3BGRP55822 239 aaPredicted RBP10.82□□□□□ -0.68
CHD3-201ENST00000330494 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 AGR3Q8TD06 166 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 PIK3R5Q8WYR1 880 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 PPP1R36Q96LQ0 422 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 BPIFA3Q9BQP9 254 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 IQCA1LA6NCM1 817 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 NEMP1O14524 444 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 TBXAS1P24557 533 aaPredicted RBP10.82□□□□□ -0.68
CHD3-201ENST00000330494 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 TUFT1Q9NNX1 390 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
CHD3-201ENST00000330494 PPFIA2O75334 1257 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SKIV2LQ15477 1246 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 PHLDB3Q6NSJ2 640 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 ANKMY2Q8IV38 441 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SRRM1Q8IYB3 904 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 NOC2LQ9Y3T9 749 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 IQANK1A0A1B0GTG1 560 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RASA4BC9J798 803 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RASA4O43374 803 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 HSPA6P17066 643 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 HOXD10P28358 340 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RBM41Q96IZ5 413 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 MRPL46Q9H2W6 279 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 SEL1LQ9UBV2 794 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 TFR2Q9UP52 801 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 GGCXP38435 758 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms