RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MS4A14Q96JA4 679 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC1A1P43005 524 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 IZUMO3Q5VZ72 239 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CDKL3Q8IVW4 592 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ST13P4Q8IZP2 240 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CHMP6Q96FZ7 201 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 NMT1P30419 496 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 COPS2P61201 443 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 NCAPHQ15003 741 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 SYDE1Q6ZW31 735 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM59Q8IWR1 403 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-201ENST00000323853 ACAD11Q709F0 780 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 HAUS5O94927 633 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 FGFR4P22455 802 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PIP4K2CQ8TBX8 421 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 CYTH2Q99418 400 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 VIPAS39Q9H9C1 493 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 ANKRD65E5RJM6 399 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 HSPA9P38646 679 aaKnown RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC35G2Q8TBE7 412 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 CHP1Q99653 195 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PHF2O75151 1096 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PAPOLAP51003 745 aaKnown RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 KRT80Q6KB66 452 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 MMP19Q99542 508 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PCSK1NQ9UHG2 260 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 CYP26A1O43174 497 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 BRAFP15056 766 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 FBXL13Q8NEE6 735 aa11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 TOPORSQ9NS56 1045 aaPredicted RBP11.6□□□□□ -0.55
SNRNP200-201ENST00000323853 CREB3O43889 395 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 HUS1O60921 280 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 SDC4P31431 198 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 EPHB1P54762 984 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 NOP14P78316 857 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 FSD1LQ9BXM9 530 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 HSPBP1Q9NZL4 362 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 AGO2Q9UKV8 859 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 PRMT1Q99873 361 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ACAD9Q9H845 621 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 STK33Q9BYT3 514 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ZCCHC17Q9NP64 241 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM33Q9UPN9 1127 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 FNDC3AQ9Y2H6 1198 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 APOEP02649 317 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 GNAT1P11488 350 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 HP1BP3Q5SSJ5 553 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 HAUS6Q7Z4H7 955 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 HERC5Q9UII4 1024 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 C1orf167Q5SNV9 1468 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ASAP2O43150 1006 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 PPARGP37231 505 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 AP1B1Q10567 949 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 C1orf228Q6PIY5 440 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ATP11CQ8NB49 1132 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 VPS11Q9H270 941 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 LDHDQ86WU2 507 aa11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
SNRNP200-201ENST00000323853 F5H423 210 aaPredicted RBP11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms