RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MYL7Q01449 175 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 RNF10Q8N5U6 811 aaKnown RBP16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 AGBL3Q8NEM8 1001 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 TAS2R14Q9NYV8 317 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 L3MBTL1Q9Y468 752 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 GMPSP49915 693 aaPredicted RBP16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 PPP2R2AP63151 447 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 MAPK7Q13164 816 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 BAATQ14032 418 aaPredicted RBP16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 BMT2Q1RMZ1 405 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 FAM83AQ86UY5 434 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 ARFGAP2Q8N6H7 521 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 KAT5Q92993 513 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 HACL1Q9UJ83 578 aa16.77■□□□□ 0.28
SHROOM1-201ENST00000319854 EMSYQ7Z589 1322 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 TMEM110-MUSTN1A8MSY1 372 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 DRD4P21917 467 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 YWHABP31946 246 aaKnown RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 HMGCS2P54868 508 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 MAGOHP61326 146 aaKnown RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 CCDC50Q8IVM0 306 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 USP38Q8NB14 1042 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 MAGOHBQ96A72 148 aaKnown RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 INTS2Q9H0H0 1204 aaKnown RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 UBE2TQ9NPD8 197 aaPredicted RBP16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 STK24Q9Y6E0 443 aa16.77■□□□□ 0.27
SHROOM1-201ENST00000319854 P4HBP07237 508 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 AGO4Q9HCK5 861 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 LARSQ9P2J5 1176 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 FBXL5Q9UKA1 691 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 FOXN3O00409 490 aaPredicted RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 DHX15O43143 795 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 RARRES1P49788 294 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 GALCP54803 685 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 PPP1R7Q15435 360 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 LRIG3Q6UXM1 1119 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 PEX26Q7Z412 305 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 CPLX4Q7Z7G2 160 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 RNF14Q9UBS8 474 aa16.76■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 KRT13P13646 458 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 COPB2P35606 906 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 PHLDB3Q6NSJ2 640 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 UBLCP1Q8WVY7 318 aaPredicted RBP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 F8VZ95 297 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 CALCAP01258 141 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 HSD17B4P51659 736 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 BFSP1Q12934 665 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 MYO1EQ12965 1108 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 NSMCE1Q8WV22 266 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC8A1P32418 973 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 INHBEP58166 350 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 HAUS6Q7Z4H7 955 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 TCP11Q8WWU5 503 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 RIT2Q99578 217 aa16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 DDX47Q9H0S4 455 aaKnown RBP16.75■□□□□ 0.27
SHROOM1-201ENST00000319854 EME2A4GXA9 379 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 TBC1D12O60347 775 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 DNAJC8O75937 253 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 CCNE2O96020 404 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 BAG6P46379 1132 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 MAP2K1Q02750 393 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 PGM5Q15124 567 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 TRIM31Q9BZY9 425 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC38A10Q9HBR0 1119 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 RNF146Q9NTX7 359 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 IGSF9BQ9UPX0 1349 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 MYH11P35749 1972 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 WDR46O15213 610 aaKnown RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 SLC26A4O43511 780 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 SOX5P35711 763 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 C3orf20Q8ND61 904 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 PGAP2Q9UHJ9 254 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
SHROOM1-201ENST00000319854 ITGA4P13612 1032 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms