RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 CLDND1Q9NY35 253 aa32.16■■■□□ 2.74
SYNGR1-202ENST00000318801 GIT1Q9Y2X7 761 aa32.16■■■□□ 2.74
SYNGR1-202ENST00000318801 NPTXRO95502 500 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 ALDH2P05091 517 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 TXLNAP40222 546 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 TMEM119Q4V9L6 283 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 APOL6Q9BWW8 343 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 TLE6Q9H808 572 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 KMT5AQ9NQR1 393 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 ENTPD7Q9NQZ7 604 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 STK39Q9UEW8 545 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 CCDC39Q9UFE4 941 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 PLXNA4Q9HCM2 1894 aa32.15■■■□□ 2.74
SYNGR1-202ENST00000318801 XIRP2A4UGR9 3374 aa32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 NR1I2O75469 434 aa32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 PBX3P40426 434 aa32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 PUS10Q3MIT2 529 aaKnown RBP32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 SLC39A11Q8N1S5 342 aa32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 ZNF396Q96N95 335 aaPredicted RBP32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 SRPRBQ9Y5M8 271 aaKnown RBP32.14■■■□□ 2.74
SYNGR1-202ENST00000318801 ARL5CA6NH57 179 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 MARCKSP29966 332 aaPredicted RBP32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 NPTX2P47972 431 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 PTPAQ15257 358 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 FAM173BQ6P4H8 233 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 TMC7Q7Z402 723 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 CCDC113Q9H0I3 377 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 NRDE2Q9H7Z3 1164 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 FAM50BQ9Y247 325 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 HES2Q9Y543 173 aa32.13■■■□□ 2.73
SYNGR1-202ENST00000318801 POMCP01189 267 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 IRS1P35568 1242 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 SLC12A3P55017 1021 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 HYAL1Q12794 435 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 LEXMQ3ZCV2 418 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 CDR2LQ86X02 465 aaPredicted RBP32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 TCF25Q9BQ70 676 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 TMEM175Q9BSA9 504 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 CCSER1Q9C0I3 900 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 PARP2Q9UGN5 583 aa32.12■■■□□ 2.73
SYNGR1-202ENST00000318801 BMP1P13497 986 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 KCNQ1P51787 676 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 RAD51AP2Q09MP3 1159 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 ADAMTS19Q8TE59 1207 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 GAD1Q99259 594 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 CDCA3Q99618 268 aaPredicted RBP32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 KIFC3Q9BVG8 833 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 NXF3Q9H4D5 531 aaKnown RBP32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 TMEM134Q9H6X4 195 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 LARSQ9P2J5 1176 aaKnown RBP32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 FAN1Q9Y2M0 1017 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 TTC28Q96AY4 2481 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 VCANP13611 3396 aa32.11■■■□□ 2.73
SYNGR1-202ENST00000318801 MYH11P35749 1972 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 NT5C1B-RDH14C9J2C7 533 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 H0YCG3 227 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 KRT18P05783 430 aaKnown RBP32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 GALTP07902 379 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 MLH1P40692 756 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 NRIP1P48552 1158 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 ERVFC1P60507 584 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 COL19A1Q14993 1142 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 SLC39A14Q15043 492 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 DCAF4L1Q3SXM0 396 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 RBM23Q86U06 439 aaKnown RBP32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 TMEM87AQ8NBN3 555 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 RPS6KC1Q96S38 1066 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 NTPCRQ9BSD7 190 aaKnown RBP32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 RNF39Q9H2S5 420 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 PDZD7Q9H5P4 517 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 NCOR1O75376 2440 aa32.1■■■□□ 2.73
SYNGR1-202ENST00000318801 PLS3P13797 630 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 PLCG1P19174 1290 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 STRN3Q13033 797 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 DHX8Q14562 1220 aaKnown RBP32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 KARSQ15046 597 aaKnown RBP32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 STK38Q15208 465 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 ATF7IP2Q5U623 682 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 ZNF280BQ86YH2 543 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 DAW1Q8N136 415 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 KRI1Q8N9T8 703 aaKnown RBP32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 SPIRE2Q8WWL2 714 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 IGSF21Q96ID5 467 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 ODF2LQ9ULJ1 636 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 MORC2Q9Y6X9 1032 aaPredicted RBP32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 ZMYM2Q9UBW7 1377 aa32.09■■■□□ 2.73
SYNGR1-202ENST00000318801 SFI1A8K8P3 1242 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 INPPL1O15357 1258 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 SRGAP2BP0DMP2 458 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 AKAP5P24588 427 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 GRIN1Q05586 938 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 SMC1AQ14683 1233 aaKnown RBP32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 CTC1Q2NKJ3 1217 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 GPBP1Q86WP2 473 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 EFHBQ8N7U6 833 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 USP28Q96RU2 1077 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 MRPL4Q9BYD3 311 aaKnown RBP32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 DNAJB4Q9UDY4 337 aa32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 FBXO2Q9UK22 296 aaPredicted RBP32.08■■■□□ 2.73
SYNGR1-202ENST00000318801 DDIT3P35638 169 aa32.07■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms