RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 DNAJC1Q96KC8 554 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLCB1Q9NQ66 1216 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 STK10O94804 968 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 C6orf163Q5TEZ5 329 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SCUBE1Q8IWY4 988 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 OLFM3Q96PB7 478 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 BTBD7Q9P203 1132 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 REXO2Q9Y3B8 237 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 WDR90Q96KV7 1748 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SMAPO00193 183 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 DAPK3O43293 454 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 RCN1Q15293 331 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SEC23AQ15436 765 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 KLC3Q6P597 504 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 SCG3Q8WXD2 468 aaKnown RBP12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 CASP10Q92851 521 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 IL17RBQ9NRM6 502 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 LZTS1Q9Y250 596 aa12.51□□□□□ -0.41
LDLRAD3-201ENST00000315571 FAM170AA1A519 330 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 GOLGA8AA7E2F4 631 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 KRIT1O00522 736 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 CNPY1Q3B7I2 92 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RUBCNQ92622 972 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 NAP1L3Q99457 506 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 FAM192AQ9GZU8 254 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 MRGBPQ9NV56 204 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 ITM2BQ9Y287 266 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZNF510Q9Y2H8 683 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 C6orf183Q5T699 404 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RRAGAQ7L523 313 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZNF654Q8IZM8 581 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 ERP27Q96DN0 273 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 DDX47Q9H0S4 455 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 TBC1D7Q9P0N9 293 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 SCN4AP35499 1836 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 CAPN9O14815 690 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RAD21O60216 631 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 RARAP10276 462 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 TBL3Q12788 808 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 AGBL2Q5U5Z8 902 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
LDLRAD3-201ENST00000315571 TTLL1O95922 423 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 KRT13P13646 458 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 CAP2P40123 477 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 THOC7Q6I9Y2 204 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 GSDMBQ8TAX9 411 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZNF408Q9H9D4 720 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ASAP2O43150 1006 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ASNSP08243 561 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRRC36Q1X8D7 754 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRRC8BQ6P9F7 803 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms