RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 P4HA2O15460 535 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 KRT86O43790 486 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 CTNND1O60716 968 aaKnown RBP8.52□□□□□ -1.05
CNOT4-201ENST00000315544 TSPY3P0CV98 308 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 TSPY8P0CW00 308 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 XBP1P17861 261 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 MFSD14BQ5SR56 506 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 DRICH1Q6PGQ1 229 aaPredicted RBP8.52□□□□□ -1.05
CNOT4-201ENST00000315544 SFR1Q86XK3 245 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 IFNL1Q8IU54 200 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 WDTC1Q8N5D0 677 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 VPS18Q9P253 973 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 JAG2Q9Y219 1238 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 TISP43B9A030 160 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 CFHP08603 1231 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 DHRS4L1P0CG22 281 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 GM2AP17900 193 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ATP2B1P20020 1258 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 GCKP35557 465 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 MAGEA3P43357 314 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 RTP1P59025 263 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 GTF2IP78347 998 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 WDR72Q3MJ13 1102 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ANKRD20A8PQ5CZ79 823 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 FAM91A1Q658Y4 838 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 LRRC47Q8N1G4 583 aaKnown RBP8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ZNF473Q8WTR7 871 aaKnown RBP8.51□□□□□ -1.05
CNOT4-201ENST00000315544 TEKT1Q969V4 418 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 RPS6KC1Q96S38 1066 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 NUP88Q99567 741 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-201ENST00000315544 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 NOC2LQ9Y3T9 749 aaKnown RBP8.51□□□□□ -1.05
CNOT4-201ENST00000315544 O00370 1275 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 SOX5P35711 763 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ZNF268Q14587 947 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-201ENST00000315544 TMEM161BQ8NDZ6 487 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 PLIN2Q99541 437 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 PTPRHQ9HD43 1115 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 XPNPEP1Q9NQW7 623 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 DENND4CQ5VZ89 1909 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 E7ESA3 106 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 NR3C1P04150 777 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 EDNRBP24530 442 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 CUL1Q13616 776 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 MAMDC4Q6UXC1 1216 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 TADA2BQ86TJ2 420 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 PBKQ96KB5 322 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 RNF186Q9NXI6 227 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 ANKIB1Q9P2G1 1089 aa8.51□□□□□ -1.05
CNOT4-201ENST00000315544 IGF2BP3O00425 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 NPHP1O15259 732 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 TYROBPO43914 113 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ARP10275 920 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 RARAP10276 462 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 MRPL12P52815 198 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 GALCP54803 685 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 MORN1Q5T089 497 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 PPFIBP1Q86W92 1011 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SLC20A1Q8WUM9 679 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 PHACTR1Q9C0D0 580 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 NFU1Q9UMS0 254 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 LAMA2P24043 3122 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ASAP2O43150 1006 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ZNF862O60290 1169 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 PLCG2P16885 1265 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 PTPRAP18433 802 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 HNRNPH1P31943 449 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SMTNP53814 917 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SNRPFP62306 86 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 FAM114A1Q8IWE2 563 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SCYL3Q8IZE3 742 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SLC35G2Q8TBE7 412 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ZNF526Q8TF50 670 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 FAM129AQ9BZQ8 928 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 KATNBL1Q9H079 304 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 THAP2Q9H0W7 228 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 FAM207AQ9NSI2 230 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 EVPLQ92817 2033 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ESYT3A0FGR9 886 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 DCAF8L1A6NGE4 600 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 GABBR2O75899 941 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 KCNA2P16389 499 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 SLC16A2P36021 539 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ECE1P42892 770 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 MRPS25P82663 173 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ACVR2BQ13705 512 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 AUHQ13825 339 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 VGLL4Q14135 290 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 OASLQ15646 514 aaKnown RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 CCDC96Q2M329 555 aa8.5□□□□□ -1.05
CNOT4-201ENST00000315544 ZC2HC1CQ53FD0 456 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-201ENST00000315544 RRAGAQ7L523 313 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms