RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLITRK3O94933 977 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 DPEP1P16444 411 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 MSH2P43246 934 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 SLC12A3P55017 1021 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 PSMD2Q13200 908 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 PLVAPQ9BX97 442 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.23
RETREG3-201ENST00000309428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.58□□□□□ -0.23
RETREG3-201ENST00000309428 SPAG7O75391 227 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 ANP32DO95626 131 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 MTMR1Q13613 665 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 ALG13Q9NP73 1137 aaKnown RBP13.58□□□□□ -0.24
RETREG3-201ENST00000309428 DCTN4Q9UJW0 460 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 NAGPAQ9UK23 515 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 MRPL11Q9Y3B7 192 aaKnown RBP13.58□□□□□ -0.24
RETREG3-201ENST00000309428 IKBKGQ9Y6K9 419 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 IGF2BP3O00425 579 aaKnown RBP eCLIP13.58□□□□□ -0.24
RETREG3-201ENST00000309428 CD58P19256 250 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 FLT3P36888 993 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 USP11P51784 963 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 HMGCS2P54868 508 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 TSNAXIP1Q2TAA8 658 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 C1orf54Q8WWF1 131 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-201ENST00000309428 DONSONQ9NYP3 566 aa13.58□□□□□ -0.24
RETREG3-201ENST00000309428 LARSQ9P2J5 1176 aaKnown RBP13.58□□□□□ -0.24
RETREG3-201ENST00000309428 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 HOXA10P31260 410 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 PRELPP51888 382 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ACCSLQ4AC99 568 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ZBTB33Q86T24 672 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 EPS8L3Q8TE67 593 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 NYAP2Q9P242 653 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 LRRD1A4D1F6 860 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ACOT2P49753 483 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 IFI35P80217 286 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 RASIP1Q5U651 963 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 PPFIBP2Q8ND30 876 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 PPP1R14CQ8TAE6 165 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 SLC35G2Q8TBE7 412 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 IQCGQ9H095 443 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 TTC7AQ9ULT0 858 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 LGR5O75473 907 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 GNA14O95837 355 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 BRAFP15056 766 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 RPUSD2Q8IZ73 545 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 SYT2Q8N9I0 419 aaPredicted RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ARHGEF26Q96DR7 871 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 FAM213AQ9BRX8 229 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 INTS2Q9H0H0 1204 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 ZNF408Q9H9D4 720 aa13.57□□□□□ -0.24
RETREG3-201ENST00000309428 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
RETREG3-201ENST00000309428 GJB6O95452 261 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
RETREG3-201ENST00000309428 MARCKSL1P49006 195 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ZNF844Q08AG5 666 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 FBXO25Q8TCJ0 367 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 DTX3LQ8TDB6 740 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 SLC35C1Q96A29 364 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 NACC1Q96RE7 527 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 CYTH2Q99418 400 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ZHX2Q9Y6X8 837 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 STRCQ7RTU9 1775 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 UBOX5O94941 541 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
RETREG3-201ENST00000309428 IGBP1P78318 339 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
RETREG3-201ENST00000309428 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 TRPM8Q7Z2W7 1104 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 NLRX1Q86UT6 975 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ARMC2Q8NEN0 867 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ZNF653Q96CK0 615 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 PITPNM3Q9BZ71 974 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 CNOT10Q9H9A5 744 aaKnown RBP13.56□□□□□ -0.24
RETREG3-201ENST00000309428 EHMT1Q9H9B1 1298 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 ATP9AO75110 1047 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 FMO5P49326 533 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 MXI1P50539 228 aa13.56□□□□□ -0.24
RETREG3-201ENST00000309428 PDE6CP51160 858 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms