RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 FAM84AQ96KN4 292 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 TMEM117Q9H0C3 514 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 TOPORSQ9NS56 1045 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 PLXNA1Q9UIW2 1896 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 LOC102724159A0A0B4J2E5 919 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 GFPT2O94808 682 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 MKRN4PQ13434 485 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 PWP2Q15269 919 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 MAMDC4Q6UXC1 1216 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 ZNF571Q7Z3V5 609 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 ABRAQ8N0Z2 381 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 ZNF668Q96K58 619 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 APEX2Q9UBZ4 518 aa24.38■■□□□ 1.49
PDLIM2-202ENST00000308354 H0YCG3 227 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 IGF2BP3O00425 579 aaKnown RBP eCLIP24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 MAPK13O15264 365 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 MAP2K1Q02750 393 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 ARHGAP44Q17R89 818 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 TMCO3Q6UWJ1 677 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 PARD3BQ8TEW8 1205 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 RNPEPQ9H4A4 650 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 LRRIQ3A6PVS8 624 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 RBAK-RBAKDNI3L0D1 243 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 MOCS3O95396 460 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 GRB14Q14449 540 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 DRAP1Q14919 205 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 PLEKHH3Q7Z736 793 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 GPD1LQ8N335 351 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 TARS2Q9BW92 718 aaKnown RBP24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 SMARCAD1Q9H4L7 1026 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 ANKZF1Q9H8Y5 726 aa24.37■■□□□ 1.49
PDLIM2-202ENST00000308354 ANO9A1A5B4 782 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 SEC31AO94979 1220 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 GJB1P08034 283 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 SRGAP2CP0DJJ0 459 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 DLATP10515 647 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 MXI1P50539 228 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 SLC18A3Q16572 532 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 CHADLQ6NUI6 762 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 DNAAF5Q86Y56 855 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 TRIM58Q8NG06 486 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 MAML3Q96JK9 1138 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 FBXL18Q96ME1 805 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 HAPLN2Q9GZV7 340 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 KATNBL1Q9H079 304 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 VTA1Q9NP79 307 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 SALL4Q9UJQ4 1053 aa24.36■■□□□ 1.49
PDLIM2-202ENST00000308354 F8VZ95 297 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 RASAL3Q86YV0 1011 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 NPLOC4Q8TAT6 608 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 ELMO3Q96BJ8 720 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 GPR88Q9GZN0 384 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 ANKFY1Q9P2R3 1169 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 TTLL13PA6NNM8 815 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 PJA2O43164 708 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 TACC1O75410 805 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 ZRANB2O95218 330 aaKnown RBP eCLIP24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 GARTP22102 1010 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 ACOT2P49753 483 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 EPC2Q52LR7 807 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 ARHGEF19Q8IW93 802 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 NOA1Q8NC60 698 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 AFG1LQ8WV93 481 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 CAPZA3Q96KX2 299 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 STK33Q9BYT3 514 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 KCNG1Q9UIX4 513 aa24.35■■□□□ 1.49
PDLIM2-202ENST00000308354 STAT1P42224 750 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 IGBP1P78318 339 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 CYP24A1Q07973 514 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 CETN1Q12798 172 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 MFSD14AQ96MC6 490 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 PACSIN1Q9BY11 444 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 UBE2TQ9NPD8 197 aaPredicted RBP24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 ADCY3O60266 1144 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 EVI5O60447 810 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 GH1P01241 217 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 SOX5P35711 763 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 LAMTOR4Q0VGL1 99 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 LAMC2Q13753 1193 aa24.34■■□□□ 1.49
PDLIM2-202ENST00000308354 FAM170AA1A519 330 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 N4BP1O75113 896 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 RHOXF2BP0C7M4 288 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 ZNF286BP0CG31 522 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 MATR3P43243 847 aaKnown RBP eCLIP24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 NLRP11P59045 1033 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 CC2D1AQ6P1N0 951 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 RHPN2Q8IUC4 686 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 METTL13Q8N6R0 699 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 RNF149Q8NC42 400 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 SEMA4DQ92854 862 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 MMS19Q96T76 1030 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 RHOXF2Q9BQY4 288 aa24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 ZHX1Q9UKY1 873 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-202ENST00000308354 ZNF185O15231 689 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 LGALS2P05162 132 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 HARSP12081 509 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 MAPK4P31152 587 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 WNT7BP56706 349 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 SEZ6Q53EL9 994 aa24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms