RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KCND2Q9NZV8 630 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 NFKBIAP25963 317 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.31
USP42-201ENST00000306177 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 NDUFAF2Q8N183 169 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 HPS3Q969F9 1004 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
USP42-201ENST00000306177 ITIH6Q6UXX5 1313 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 ATP1A1P05023 1023 aaKnown RBP16.96■□□□□ 0.3
USP42-201ENST00000306177 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.3
USP42-201ENST00000306177 ART3Q13508 389 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 XKR3Q5GH77 459 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 PARVAQ9NVD7 372 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 PPP1R9AQ9ULJ8 1098 aa16.96■□□□□ 0.3
USP42-201ENST00000306177 PACSIN2Q9UNF0 486 aaPredicted RBP16.96■□□□□ 0.3
USP42-201ENST00000306177 CLGNO14967 610 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 DCTN3O75935 186 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 HSPA4LO95757 839 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 TMPRSS15P98073 1019 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 PDCLQ13371 301 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 FSD1LQ9BXM9 530 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 TTC7AQ9ULT0 858 aaPredicted RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 CTDNEP1O95476 244 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 SRGNP10124 158 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 KLRK1P26718 216 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 RFC1P35251 1148 aaPredicted RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 TMTC4Q5T4D3 741 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 PARD3BQ8TEW8 1205 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 ELAC2Q9BQ52 826 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 TRIM55Q9BYV6 548 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 CSPG5O95196 566 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 SMARCA1P28370 1054 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 ELMSAN1Q6PJG2 1045 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 WDR75Q8IWA0 830 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 RNF149Q8NC42 400 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 URGCPQ8TCY9 931 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 REEP2Q9BRK0 252 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 PRR12Q9ULL5 1215 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 ESYT3A0FGR9 886 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 A8MXQ7 604 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 GOLGA8MH3BSY2 632 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 CTIFO43310 598 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 RTN2O75298 545 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 FAM102AQ5T9C2 384 aaPredicted RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 CCDC137Q6PK04 289 aaKnown RBP16.95■□□□□ 0.3
USP42-201ENST00000306177 ADAM21Q9UKJ8 722 aa16.95■□□□□ 0.3
USP42-201ENST00000306177 CREB3O43889 395 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 HEATR6Q6AI08 1181 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 EPM2AIP1Q7L775 607 aaPredicted RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 ZNF560Q96MR9 790 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 SERPINI1Q99574 410 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 PRKCBP05771 671 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 BCAR1P56945 870 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 MTF1Q14872 753 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 KIF12Q96FN5 646 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 GNGT2O14610 69 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 KRT14P02533 472 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 KCNJ6P48051 423 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 BAATQ14032 418 aaPredicted RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 DHX34Q14147 1143 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 CHMP6Q96FZ7 201 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 SNF8Q96H20 258 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 FGFR1OP2Q9NVK5 253 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 NVLO15381 856 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 CYP26A1O43174 497 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 TXNP10599 105 aaKnown RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 EFHC2Q5JST6 749 aa16.94■□□□□ 0.3
USP42-201ENST00000306177 HIBCHQ6NVY1 386 aaPredicted RBP16.94■□□□□ 0.3
USP42-201ENST00000306177 PSMD14O00487 310 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 MAGOHP61326 146 aaKnown RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 GPS1Q13098 491 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 CDKL3Q8IVW4 592 aaPredicted RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 SCG3Q8WXD2 468 aaKnown RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 DDX27Q96GQ7 796 aaKnown RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 STK33Q9BYT3 514 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 APEX2Q9UBZ4 518 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 BNIP3LO60238 219 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 ADORA2BP29275 332 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 ROR1Q01973 937 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 SLC18A3Q16572 532 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 GSTA4O15217 222 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms