RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
LSM3-201ENST00000306024 DPYDQ12882 1025 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 TMEM154Q6P9G4 183 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 FAM228AQ86W67 206 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 DNAJC7Q99615 494 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
LSM3-201ENST00000306024 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 ARHGEF35A5YM69 484 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 RAD51CO43502 376 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 PALMO75781 387 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 PLEKP08567 350 aaPredicted RBP11.72□□□□□ -0.53
LSM3-201ENST00000306024 KRT13P13646 458 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 KLK7P49862 253 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 CUL1Q13616 776 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 ANKRD20A2Q5SQ80 823 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 ANKRD20A1Q5TYW2 823 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 ANKRD20A3Q5VUR7 823 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 LRIG3Q6UXM1 1119 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 ARHGAP22Q7Z5H3 698 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 PPFIBP2Q8ND30 876 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 WNK4Q96J92 1243 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 KLHL14Q9P2G3 628 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
LSM3-201ENST00000306024 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
LSM3-201ENST00000306024 SLC25A27O95847 323 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 ATP4AP20648 1035 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
LSM3-201ENST00000306024 TATDN2Q93075 761 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 DLGAP2Q9P1A6 1054 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 CCDC169A6NNP5 214 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 FAM13AO94988 1023 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 CHN1P15882 459 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 COPB2P35606 906 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 ROR2Q01974 943 aaKnown RBP11.71□□□□□ -0.53
LSM3-201ENST00000306024 HHATQ5VTY9 493 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 CEP128Q6ZU80 1094 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 FGD4Q96M96 766 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 RIPK3Q9Y572 518 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 USH1CQ9Y6N9 552 aa11.71□□□□□ -0.53
LSM3-201ENST00000306024 DLEC1Q9Y238 1755 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 PYGLP06737 847 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 OAZ1P54368 228 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 MRPS35P82673 323 aaKnown RBP11.71□□□□□ -0.54
LSM3-201ENST00000306024 KLC1Q07866 573 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 TAOK1Q7L7X3 1001 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 GPBP1Q86WP2 473 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 LAMB1P07942 1786 aa11.71□□□□□ -0.54
LSM3-201ENST00000306024 RAB27AP51159 221 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 HERC4Q5GLZ8 1057 aaPredicted RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 ZNF365Q70YC5 407 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 ERICH1Q86X53 443 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 SMC1BQ8NDV3 1235 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 EZH1Q92800 747 aaPredicted RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 MYH6P13533 1939 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 POTECB2RU33 542 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 UBOX5O94941 541 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 GSTA1P08263 222 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 PDE6CP51160 858 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 GFPT1Q06210 699 aaPredicted RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 NUGGCQ68CJ6 796 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 TLDC1Q6P9B6 456 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 C6orf89Q6UWU4 347 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 LRRC34Q8IZ02 419 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 GBP7Q8N8V2 638 aaPredicted RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 DDX47Q9H0S4 455 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 SMNDC1O75940 238 aaKnown RBP eCLIP11.7□□□□□ -0.54
LSM3-201ENST00000306024 PGK2P07205 417 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 ITIH3Q06033 890 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 SPRED3Q2MJR0 410 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 AGBL2Q5U5Z8 902 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 APTXQ7Z2E3 356 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 TRIM74Q86UV6 250 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 GLG1Q92896 1179 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 TSG101Q99816 390 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 MXRA8Q9BRK3 442 aa11.7□□□□□ -0.54
LSM3-201ENST00000306024 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
LSM3-201ENST00000306024 VCX3BQ9H321 246 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms