RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 GPD1LQ8N335 351 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 POLR3CQ9BUI4 534 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-201ENST00000303354 TBC1D22BQ9NU19 505 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 FLT1P17948 1338 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 GOLGA8RI6L899 631 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 CETPP11597 493 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 SESN2P58004 480 aaPredicted RBP8.3□□□□□ -1.08
SCN9A-201ENST00000303354 PGLYRP2Q96PD5 576 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 PDE11AQ9HCR9 933 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 USP20Q9Y2K6 914 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 MYL4P12829 197 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 PLIN5Q00G26 463 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 KRT17Q04695 432 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 BTKQ06187 659 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 TWF1Q12792 350 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 IER5Q5VY09 327 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 HVCN1Q96D96 273 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
SCN9A-201ENST00000303354 ADGRL2O95490 1459 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CYP2C8P10632 490 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 RAP1GAPP47736 663 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ALDH7A1P49419 539 aaKnown RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 FAM180AQ6UWF9 173 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 FAM167AQ96KS9 214 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PNMA8BQ9ULN7 279 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 EXOC1LA0A1B0GW35 172 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 TSPAN3O60637 253 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 DGKZQ13574 1117 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 LY6KQ17RY6 165 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SPDYAQ5MJ70 313 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CYP4A22Q5TCH4 519 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 GJB7Q6PEY0 223 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PPM1NQ8N819 430 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 XXYLT1Q8NBI6 393 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 LZICQ8WZA0 190 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 DCUN1D1Q96GG9 259 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 MTIF3Q9H2K0 278 aaKnown RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SENP2Q9HC62 589 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SENP1Q9P0U3 644 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 FTLP02792 175 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 TOB2Q14106 344 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 C2CD6Q53TS8 623 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CARNMT1Q8N4J0 409 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CLMNQ96JQ2 1002 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 FBXL21Q9UKT6 434 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ADGRA2Q96PE1 1338 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 C17orf102A2RUQ5 167 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 TBC1D12O60347 775 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 FGGP02679 453 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 NPEPPSP55786 919 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 KRT76Q01546 638 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 DRAP1Q14919 205 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 VPS72Q15906 364 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 MOB2Q70IA6 237 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PLEKHA5Q9HAU0 1116 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 OGFRQ9NZT2 677 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PCDHA10Q9Y5I2 948 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PAMP19021 973 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 RBM23Q86U06 439 aaKnown RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SLC7A14Q8TBB6 771 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ACER1Q8TDN7 264 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 MORC4Q8TE76 937 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ARL8AQ96BM9 186 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 GLT1D1Q96MS3 346 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 STARD7Q9NQZ5 370 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SDC4P31431 198 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 PGBD4Q96DM1 585 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SKAP2O75563 359 aaPredicted RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 SMTNL2Q2TAL5 461 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 LMNTD2Q8IXW0 634 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 MAGED4Q96JG8 741 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 TRIM10Q9UDY6 481 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 ANKRD65E5RJM6 399 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CCNE1P24864 410 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 LRRC14Q15048 493 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 KRT31Q15323 416 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 NSUN4Q96CB9 384 aaKnown RBP8.29□□□□□ -1.08
SCN9A-201ENST00000303354 CACNA2D2Q9NY47 1150 aa8.29□□□□□ -1.08
SCN9A-201ENST00000303354 IFNAR1P17181 557 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 DR1Q01658 176 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 EFHC2Q5JST6 749 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ARHGAP24Q8N264 748 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 PPHLN1Q8NEY8 458 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 SLC26A7Q8TE54 656 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ZFYVE19Q96K21 471 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 RWDD2AQ9UIY3 292 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 SLFN14P0C7P3 912 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ALKBH5Q6P6C2 394 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 C2orf40Q9H1Z8 148 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms