RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ST3GAL2Q16842 350 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 NLRP7Q8WX94 980 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 PGBD1Q96JS3 809 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 DHX33Q9H6R0 707 aaKnown RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 LTB4R2Q9NPC1 389 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 SH3GLB2Q9NR46 395 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 CDH7Q9ULB5 785 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 SMG5Q9UPR3 1016 aaKnown RBP7.28□□□□□ -1.24
ITGB1-201ENST00000302278 FAN1Q9Y2M0 1017 aa7.28□□□□□ -1.24
ITGB1-201ENST00000302278 ADAMTS3O15072 1205 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 CCDC12Q8WUD4 166 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 LPPQ93052 612 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 SECISBP2LQ93073 1101 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 AGXT2Q9BYV1 514 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 UNC45AQ9H3U1 944 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 BRPF3Q9ULD4 1205 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 EML5Q05BV3 1969 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 A0A087WZ62 844 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 PRPF3O43395 683 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 TGM5O43548 720 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 DCNP07585 359 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 LAIR1Q6GTX8 287 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 TAS1R1Q7RTX1 841 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 ETNPPLQ8TBG4 499 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 RIN2Q8WYP3 895 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 FDXACB1Q9BRP7 624 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 BCO2Q9BYV7 579 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 FRYLO94915 3013 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 DDX39AO00148 427 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 FGFR4P22455 802 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 PMLP29590 882 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 HOXA6P31267 233 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 RFC5P40937 340 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 RTN1Q16799 776 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 CREB3L3Q68CJ9 461 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 CKAP2LQ8IYA6 745 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 DCLK2Q8N568 766 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 DAGLBQ8NCG7 672 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 GSTCDQ8NEC7 633 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 BICD2Q8TD16 824 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 PARD6AQ9NPB6 346 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 PIN4Q9Y237 131 aaKnown RBP7.27□□□□□ -1.25
ITGB1-201ENST00000302278 GIT1Q9Y2X7 761 aa7.27□□□□□ -1.25
ITGB1-201ENST00000302278 TNRC6BQ9UPQ9 1833 aaKnown RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 hCG_1642624A0A1W2PR95 340 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 ASAP2O43150 1006 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 ZNF76P36508 570 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 EVCP57679 992 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 PPP2R5CQ13362 524 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 PDXDC1Q6P996 788 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 KCNG4Q8TDN1 519 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 FGF14Q92915 247 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 MSANTD3Q96H12 275 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 TEKT3Q9BXF9 490 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 C6orf50Q9HD87 102 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 TCEAL9Q9UHQ7 104 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 FSHRP23945 695 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 GNA11P29992 359 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 CDC27P30260 824 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 DNM2P50570 870 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 AMHR2Q16671 573 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 TWF2Q6IBS0 349 aaKnown RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 ANO5Q75V66 913 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 CELF5Q8N6W0 485 aaKnown RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 SUCLA2Q9P2R7 463 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 MYO16Q9Y6X6 1858 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 TSC2P49815 1807 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 TMEM189-UBE2V1I3L0A0 370 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 RXRAP19793 462 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 GBP2P32456 591 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 AFF1P51825 1210 aaKnown RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 NRLP54845 237 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 SLC44A4Q53GD3 710 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 FOXQ1Q9C009 403 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 CHRDQ9H2X0 955 aa7.26□□□□□ -1.25
ITGB1-201ENST00000302278 V9GY48 417 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-201ENST00000302278 DENND4CQ5VZ89 1909 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 ARL5CA6NH57 179 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 TM4SF5O14894 197 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 ZBTB43O43298 467 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 LAMTOR5O43504 91 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 CNR2P34972 360 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RBM25P49756 843 aaKnown RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 RNASELQ05823 741 aaKnown RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 NAB2Q15742 525 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 NTRK3Q16288 839 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 USP41Q3LFD5 358 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 PARM1Q6UWI2 310 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 DDX1Q92499 740 aaKnown RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 ELSPBP1Q96BH3 223 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 C22orf23Q9BZE7 217 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 VAV3Q9UKW4 847 aa7.25□□□□□ -1.25
ITGB1-201ENST00000302278 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
ITGB1-201ENST00000302278 IPPQ9Y573 584 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms