RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SMTNP53814 917 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 SLC39A4Q6P5W5 647 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 ESYT3A0FGR9 886 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 DLATP10515 647 aaKnown RBP23.71■■□□□ 1.39
TPM4-201ENST00000300933 HNRNPH1P31943 449 aaKnown RBP23.71■■□□□ 1.39
TPM4-201ENST00000300933 PAXIP1Q6ZW49 1069 aaPredicted RBP23.71■■□□□ 1.39
TPM4-201ENST00000300933 FBXO41Q8TF61 875 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 SEMA4DQ92854 862 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 OTUD5Q96G74 571 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 ELP3Q9H9T3 547 aa23.71■■□□□ 1.39
TPM4-201ENST00000300933 EIF3HO15372 352 aaKnown RBP eCLIP23.7■■□□□ 1.39
TPM4-201ENST00000300933 LMBRD2Q68DH5 695 aaPredicted RBP23.7■■□□□ 1.39
TPM4-201ENST00000300933 AENQ8WTP8 325 aaKnown RBP23.7■■□□□ 1.39
TPM4-201ENST00000300933 GRIN2DO15399 1336 aa23.7■■□□□ 1.39
TPM4-201ENST00000300933 IRF6O14896 467 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 PSAPP07602 524 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 CFAP221Q4G0U5 840 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 OTUD6AQ7L8S5 288 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 SAMD3Q8N6K7 520 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 TPCN2Q8NHX9 752 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 SLC30A5Q8TAD4 765 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 POMGNT1Q8WZA1 660 aa23.7■■□□□ 1.38
TPM4-201ENST00000300933 ATP4AP20648 1035 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 OAZ1P54368 228 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 NCAPG2Q86XI2 1143 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 PPM1KQ8N3J5 372 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 MMGT1Q8N4V1 131 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 ATP6V0A1Q93050 837 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 ARHGEF26Q96DR7 871 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 MAPTP10636 758 aaKnown RBP23.69■■□□□ 1.38
TPM4-201ENST00000300933 TNFAIP3P21580 790 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 MXI1P50539 228 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 RPS6KA1Q15418 735 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 TRADDQ15628 312 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 CCDC70Q6NSX1 233 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 ABHD15Q6UXT9 468 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 DAAM2Q86T65 1068 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 CCDC125Q86Z20 511 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 ARL8AQ96BM9 186 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 BICD1Q96G01 975 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 CYP26B1Q9NR63 512 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 NENFQ9UMX5 172 aa23.69■■□□□ 1.38
TPM4-201ENST00000300933 SPATA31C2B4DYI2 1134 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 HNRNPDLO14979 420 aaKnown RBP23.68■■□□□ 1.38
TPM4-201ENST00000300933 KLHL7Q8IXQ5 586 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 LRRC57Q8N9N7 239 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 KRT12Q99456 494 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 PI4K2AQ9BTU6 479 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 THAP2Q9H0W7 228 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 PDCLQ13371 301 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 KCTD16Q68DU8 428 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 KCNV1Q6PIU1 500 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 SLC35G2Q8TBE7 412 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 AP1M1Q9BXS5 423 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 POLR3FQ9H1D9 316 aaPredicted RBP23.68■■□□□ 1.38
TPM4-201ENST00000300933 WDR81Q562E7 1941 aa23.68■■□□□ 1.38
TPM4-201ENST00000300933 CEP104O60308 925 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 ATP1A2P50993 1020 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 FAM213AQ9BRX8 229 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 PNMA2Q9UL42 364 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 SGPL1O95470 568 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 ALCAMQ13740 583 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 STXBP2Q15833 593 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 EPC2Q52LR7 807 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 C8orf74Q6P047 294 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 XRRA1Q6P2D8 792 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 TAS1R3Q7RTX0 852 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 TSEN2Q8NCE0 465 aaKnown RBP23.67■■□□□ 1.38
TPM4-201ENST00000300933 RNF181Q9P0P0 153 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 LOXHD1Q8IVV2 1947 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 KIF4AO95239 1232 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 PGK2P07205 417 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 GLI1P08151 1106 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 GNPTABQ3T906 1256 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 C10orf76Q5T2E6 689 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 MAP4K3Q8IVH8 894 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 SH2D3CQ8N5H7 860 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 TAF4BQ92750 862 aa23.67■■□□□ 1.38
TPM4-201ENST00000300933 NDUFAB1O14561 156 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 MAFGO15525 162 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 ZEB2O60315 1214 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 PEX26Q7Z412 305 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 CCDC91Q7Z6B0 441 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 TAS1R2Q8TE23 839 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 DHX38Q92620 1227 aaKnown RBP23.66■■□□□ 1.38
TPM4-201ENST00000300933 RUFY1Q96T51 708 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 CAPN7Q9Y6W3 813 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 ATP2A1O14983 1001 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 CYP26A1O43174 497 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 BUB1BO60566 1050 aaPredicted RBP23.66■■□□□ 1.38
TPM4-201ENST00000300933 CETN1Q12798 172 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 TTMPQ5BVD1 217 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 SULF1Q8IWU6 871 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 PARD3BQ8TEW8 1205 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 KREMEN1Q96MU8 473 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 SENP7Q9BQF6 1050 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 SYT11Q9BT88 431 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 FHDC1Q9C0D6 1143 aaPredicted RBP23.66■■□□□ 1.38
TPM4-201ENST00000300933 ST6GALNAC4Q9H4F1 302 aa23.66■■□□□ 1.38
TPM4-201ENST00000300933 CSADQ9Y600 493 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms