RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 PMM2O15305 246 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 ADRB2P07550 413 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 CLCN3P51790 818 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 LACTBP83111 547 aaPredicted RBP17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 APBA1Q02410 837 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 CYP24A1Q07973 514 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 PPFIA1Q13136 1202 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 DPY19L2P1Q6NXN4 242 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 FAM213AQ9BRX8 229 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 ARHGAP39Q9C0H5 1083 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 DEF6Q9H4E7 631 aa17.08■□□□□ 0.33
HERPUD1-201ENST00000300302 EIF3CLB5ME19 914 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 IGHA2P01877 340 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 SERPING1P05155 500 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 RFX1P22670 979 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 GTF2H1P32780 548 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 RAPGEF1Q13905 1077 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 ACRBPQ8NEB7 543 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 PARD3BQ8TEW8 1205 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 EIF3CQ99613 913 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 SIX2Q9NPC8 291 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 AIPL1Q9NZN9 384 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 MSCO60682 206 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 PRKCBP05771 671 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 GCLMP48507 274 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 MXI1P50539 228 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 PPP3CAQ08209 521 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 GRIK4Q16099 956 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 FMNL3Q8IVF7 1028 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 CCDC127Q96BQ5 260 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 MSTO1Q9BUK6 570 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 R3HCC1Q9Y3T6 440 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 FHOD1Q9Y613 1164 aa17.07■□□□□ 0.32
HERPUD1-201ENST00000300302 A0A0B4J269 797 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 SSU72P8A0A1W2PR75 194 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 CLDN3O15551 220 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 TOM1L1O75674 476 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 TRPA1O75762 1119 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 AKR1A1P14550 325 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 PHKA2P46019 1235 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 PTENP60484 403 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 KIF22Q14807 665 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 SPA17Q15506 151 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 ASIC2Q16515 512 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 ARHGAP29Q52LW3 1261 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 C1orf220Q5T0J3 134 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 KRT39Q6A163 491 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 RNF186Q9NXI6 227 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 APEX2Q9UBZ4 518 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 AKT3Q9Y243 479 aa17.06■□□□□ 0.32
HERPUD1-201ENST00000300302 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 AKR1B10O60218 316 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 F2P00734 622 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 MAP2K2P36507 400 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 TDRD12Q587J7 1177 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 MAP7D2Q96T17 732 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 TMEM117Q9H0C3 514 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 TMEM8AQ9HCN3 771 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 LZTFL1Q9NQ48 299 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 INO80B-WBP1J3KQ70 363 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 ACKR2O00590 384 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 GJB1P08034 283 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 EIF4A3P38919 411 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 KIF11P52732 1056 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 VTI1AQ96AJ9 217 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 FNBP1Q96RU3 617 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 TCHPQ9BT92 498 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 INO80BQ9C086 356 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 FZD8Q9H461 694 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms