RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
CLPX-201ENST00000300107 DCAF4Q8WV16 495 aa13.63□□□□□ -0.23
CLPX-201ENST00000300107 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
CLPX-201ENST00000300107 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 RFX8Q6ZV50 586 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 IP6K2Q9UHH9 426 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 CHEK2O96017 543 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 UCHL3P15374 230 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 SNAP25P60880 206 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 RSPH3Q86UC2 560 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 DTX3LQ8TDB6 740 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
CLPX-201ENST00000300107 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 ZMAT2Q96NC0 199 aaKnown RBP13.62□□□□□ -0.23
CLPX-201ENST00000300107 SLC13A1Q9BZW2 595 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 ASNSD1Q9NWL6 643 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 AKT3Q9Y243 479 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 PHF2O75151 1096 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 MYBL1P10243 752 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 ITIH2P19823 946 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 TAC1P20366 129 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 CCND2P30279 289 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 NAB2Q15742 525 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 SYDE1Q6ZW31 735 aaPredicted RBP13.62□□□□□ -0.23
CLPX-201ENST00000300107 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
CLPX-201ENST00000300107 ERP27Q96DN0 273 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 ING2Q9H160 280 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 SUN2Q9UH99 717 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 DBR1Q9UK59 544 aaKnown RBP13.62□□□□□ -0.23
CLPX-201ENST00000300107 EMSYQ7Z589 1322 aa13.62□□□□□ -0.23
CLPX-201ENST00000300107 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 SERPINB4P48594 390 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 C4orf50Q6ZRC1 276 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLPX-201ENST00000300107 SLC35G2Q8TBE7 412 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 SLC16A4O15374 487 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 TRIM72Q6ZMU5 477 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 EEPD1Q7L9B9 569 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 MINPP1Q9UNW1 487 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 TRAF3IP3Q9Y228 551 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 RTN2O75298 545 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 ARSEP51690 589 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 ANTXR2P58335 489 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 HIC1Q14526 733 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 HIF1AQ16665 826 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 RYBPQ8N488 228 aaPredicted RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 CFAP74Q9C0B2 1584 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 USP11P51784 963 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 JAK3P52333 1124 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 MED21Q13503 144 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 KCTD2Q14681 263 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 LONP2Q86WA8 852 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 SIX6OS1Q8N1H7 587 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 ROPN1BQ9BZX4 212 aaPredicted RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 ROPN1Q9HAT0 212 aaPredicted RBP13.61□□□□□ -0.23
CLPX-201ENST00000300107 SLC9A2Q9UBY0 812 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 PCSK1NQ9UHG2 260 aa13.61□□□□□ -0.23
CLPX-201ENST00000300107 UTYO14607 1347 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 PDS5AQ29RF7 1337 aaKnown RBP13.6□□□□□ -0.23
CLPX-201ENST00000300107 PALM3A6NDB9 673 aaPredicted RBP13.6□□□□□ -0.23
CLPX-201ENST00000300107 FAM47DPA6NHR8 397 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 AP5Z1O43299 807 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 SCP2P22307 547 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 KLRC1P26715 233 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 JAMLQ86YT9 394 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 THNSL1Q8IYQ7 743 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 RBM15Q96T37 977 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLPX-201ENST00000300107 ERP44Q9BS26 406 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 CLDN3O15551 220 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 MRPS35P82673 323 aaKnown RBP13.6□□□□□ -0.23
CLPX-201ENST00000300107 CYB5D1Q6P9G0 228 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
CLPX-201ENST00000300107 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
CLPX-201ENST00000300107 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms