RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CTNNA2P26232 953 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 SLC12A3P55017 1021 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ROR2Q01974 943 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ARHGEF18Q6ZSZ5 1173 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 MAGEB18Q96M61 343 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 LRRC37BQ96QE4 947 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ZSWIM1Q9BR11 485 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 TBC1D10AQ9BXI6 508 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.17
TVP23A-201ENST00000299866 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
TVP23A-201ENST00000299866 PDXKO00764 312 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 ECEL1O95672 775 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 TTLL1O95922 423 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.17
TVP23A-201ENST00000299866 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 DLATP10515 647 aaKnown RBP13.96□□□□□ -0.17
TVP23A-201ENST00000299866 SKIV2L2P42285 1042 aaKnown RBP13.96□□□□□ -0.17
TVP23A-201ENST00000299866 AGGF1Q8N302 714 aaeCLIP13.96□□□□□ -0.17
TVP23A-201ENST00000299866 CHKBQ9Y259 395 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 A0A1W2PRG0 241 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 CETPP11597 493 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 HSPA6P17066 643 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 CCDC6Q16204 474 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 RBM26Q5T8P6 1007 aaKnown RBP13.96□□□□□ -0.17
TVP23A-201ENST00000299866 PRUNE1Q86TP1 453 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 LRMDAQ9H2I8 198 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 SLCO1B3Q9NPD5 702 aa13.96□□□□□ -0.17
TVP23A-201ENST00000299866 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 ASTN1O14525 1302 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 SPOPO43791 374 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.18
TVP23A-201ENST00000299866 SLC16A2P36021 539 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 CYP4A11Q02928 519 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 KRT17Q04695 432 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 STRN3Q13033 797 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 CLUL1Q15846 466 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 NEDD1Q8NHV4 660 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 TRIM4Q9C037 500 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 NAALADL1Q9UQQ1 740 aa13.96□□□□□ -0.18
TVP23A-201ENST00000299866 A0A1B0GVG6 124 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 LGR5O75473 907 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 ALAS1P13196 640 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 PARP6Q2NL67 630 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 SLC13A5Q86YT5 568 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 RUSC1Q9BVN2 902 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 MIF4GDA9UHW6 222 aaKnown RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L15C9J2P7 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L13C9JLJ4 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L11C9JVI0 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L18D6R9N7 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L22D6RA61 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L17D6RBQ6 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L19D6RCP7 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L20D6RJB6 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 RTN3O95197 1032 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 BAG3O95817 575 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L24Q0WX57 530 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 TMED2Q15363 201 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 HYIQ5T013 277 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 EPM2AIP1Q7L775 607 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 CATSPER3Q86XQ3 398 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
TVP23A-201ENST00000299866 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
TVP23A-201ENST00000299866 NPTXRO95502 500 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 ALDH3A1P30838 453 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 IL9RQ01113 521 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 TTBK2Q6IQ55 1244 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CYFIP1Q7L576 1253 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 RHOT2Q8IXI1 618 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 GALNT15Q8N3T1 639 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 TAF1P21675 1872 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 MAPK13O15264 365 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CLDN3O15551 220 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 TTC4O95801 387 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CHRNB2P17787 502 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 FMO5P49326 533 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CYP2J2P51589 502 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms