RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ANKRD65E5RJM6 399 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 RTN2O75298 545 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 DALRD3Q5D0E6 543 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 KAT5Q92993 513 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 MAGOHBQ96A72 148 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 ZNF653Q96CK0 615 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 FNBP1Q96RU3 617 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 DEFB129Q9H1M3 183 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 ATP8B3O60423 1300 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 ASTN2O75129 1339 aaPredicted RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 IGSF9BQ9UPX0 1349 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 ZNF233A6NK53 670 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 LYPLA2O95372 231 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 SGPL1O95470 568 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 FDX1P10109 184 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 HSPA9P38646 679 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 NPTX2P47972 431 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 KCTD19Q17RG1 926 aaPredicted RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 TRIM51Q9BSJ1 452 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
CDH8-201ENST00000299345 RPTORQ8N122 1335 aa14.67□□□□□ -0.06
CDH8-201ENST00000299345 EIF3HO15372 352 aaKnown RBP eCLIP14.66□□□□□ -0.06
CDH8-201ENST00000299345 COPB2P35606 906 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 HSD17B3P37058 310 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 SAMD7Q7Z3H4 446 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 C12orf56Q8IXR9 622 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 FMO2Q99518 471 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 STXBP5LQ9Y2K9 1186 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 ATP8A1Q9Y2Q0 1164 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 BAG6P46379 1132 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 RASGEF1CQ8N431 466 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 EIF1ADQ8N9N8 165 aaKnown RBP14.66□□□□□ -0.06
CDH8-201ENST00000299345 OR2W6PQ8NHA6 318 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 NSUN6Q8TEA1 469 aaKnown RBP14.66□□□□□ -0.06
CDH8-201ENST00000299345 SYNGAP1Q96PV0 1343 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 PSAPP07602 524 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 BIRC3Q13489 604 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 FBXL13Q8NEE6 735 aa14.66□□□□□ -0.06
CDH8-201ENST00000299345 PLTPP55058 493 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 GNPTABQ3T906 1256 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 WDR44Q5JSH3 913 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 WRNIP1Q96S55 665 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 POP1Q99575 1024 aaKnown RBP14.65□□□□□ -0.06
CDH8-201ENST00000299345 STRA6Q9BX79 667 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 GPR88Q9GZN0 384 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 CCNE2O96020 404 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 HSPA6P17066 643 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 TNNI1P19237 187 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 LIG4P49917 911 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 EPC2Q52LR7 807 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 MICALL2Q8IY33 904 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 CCDC105Q8IYK2 499 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 MCPH1Q8NEM0 835 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 CAMKK2Q96RR4 588 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 GINM1Q9NU53 330 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 NENFQ9UMX5 172 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 PHF20L1A8MW92 1017 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 ANKRD63C9JTQ0 380 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 VWA5AO00534 786 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
CDH8-201ENST00000299345 ADRB2P07550 413 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 SOX10P56693 466 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 PPATQ06203 517 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 STRN3Q13033 797 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 FAM213AQ9BRX8 229 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 C1orf112Q9NSG2 853 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 MTRF1LQ9UGC7 380 aaKnown RBP14.65□□□□□ -0.06
CDH8-201ENST00000299345 SNX24Q9Y343 169 aa14.65□□□□□ -0.06
CDH8-201ENST00000299345 TLDC2A0PJX2 215 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 COMTP21964 271 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 HMGCS2P54868 508 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 GUCY1A3Q02108 690 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 MTERF2Q49AM1 385 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 NBPF12Q5TAG4 269 aaPredicted RBP14.64□□□□□ -0.07
CDH8-201ENST00000299345 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 LMO3Q8TAP4 145 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 ZNF564Q8TBZ8 553 aaPredicted RBP14.64□□□□□ -0.07
CDH8-201ENST00000299345 GLG1Q92896 1179 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 CDHR1Q96JP9 859 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 RAB20Q9NX57 234 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 LCMT1Q9UIC8 334 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 TRIM66O15016 1216 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 LLGL1Q15334 1064 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 XRRA1Q6P2D8 792 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 SLC47A2Q86VL8 602 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 SSR1P43307 286 aaKnown RBP14.64□□□□□ -0.07
CDH8-201ENST00000299345 PDE4CQ08493 712 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 ZFYVE27Q5T4F4 411 aa14.64□□□□□ -0.07
CDH8-201ENST00000299345 NOP9Q86U38 636 aaKnown RBP14.64□□□□□ -0.07
CDH8-201ENST00000299345 ZNF280CQ8ND82 737 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms