RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 EPC2Q52LR7 807 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 ZNF572Q7Z3I7 529 aaPredicted RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 GORASP1Q9BQQ3 440 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 SH2D3AQ9BRG2 576 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 NMRK1Q9NWW6 199 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 CHCHD3Q9NX63 227 aaKnown RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 CYP39A1Q9NYL5 469 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 DNAJC6O75061 913 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 ASTE1Q2TB18 679 aaPredicted RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 TLCD1Q96CP7 247 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 MMTAG2Q9BU76 263 aaKnown RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 PSTPIP2Q9H939 334 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 ARMCX1Q9P291 453 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 PPARGC1AQ9UBK2 798 aaKnown RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 SYNGAP1Q96PV0 1343 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 STK10O94804 968 aaKnown RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 CASP5P51878 434 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 ZC2HC1CQ53FD0 456 aaPredicted RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 CDCA2Q69YH5 1023 aaPredicted RBP17.84■□□□□ 0.45
SBSPON-201ENST00000297354 TRABDQ9H4I3 376 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 NAALADL1Q9UQQ1 740 aa17.84■□□□□ 0.45
SBSPON-201ENST00000297354 CCDC195A0A1B0GUA6 201 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 AKAP3O75969 853 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 RTN3O95197 1032 aaPredicted RBP17.83■□□□□ 0.45
SBSPON-201ENST00000297354 ENO1P06733 434 aaKnown RBP17.83■□□□□ 0.45
SBSPON-201ENST00000297354 SETSIPP0DME0 302 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 KLRK1P26718 216 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 PGM1P36871 562 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 GSDMBQ8TAX9 411 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 SLC20A1Q8WUM9 679 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.45
SBSPON-201ENST00000297354 C12orf65Q9H3J6 166 aaKnown RBP17.83■□□□□ 0.45
SBSPON-201ENST00000297354 DDX18Q9NVP1 670 aaKnown RBP17.83■□□□□ 0.45
SBSPON-201ENST00000297354 NMT1P30419 496 aaKnown RBP17.83■□□□□ 0.44
SBSPON-201ENST00000297354 GCLMP48507 274 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 C1orf146Q5VVC0 180 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 CPNE8Q86YQ8 564 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 CEP63Q96MT8 703 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 DENND2DQ9H6A0 471 aaPredicted RBP17.83■□□□□ 0.44
SBSPON-201ENST00000297354 CYP4F11Q9HBI6 524 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 FAM47DPA6NHR8 397 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 ATP2A1O14983 1001 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 CHKAP35790 457 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 MYL7Q01449 175 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 NLRP9Q7RTR0 991 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 SYNCQ9H7C4 482 aa17.83■□□□□ 0.44
SBSPON-201ENST00000297354 GOLGA8IPA6NC78 632 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 GOLGA8JA6NMD2 632 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 PYGMP11217 842 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 BCRP11274 1271 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 ATP6V1B1P15313 513 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 ATP6V1C1P21283 382 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 DYNLT1P63172 113 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 PPP2R5CQ13362 524 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 TMCO4Q5TGY1 634 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 RFWD3Q6PCD5 774 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 RBM46Q8TBY0 533 aaKnown RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 PIGBQ92521 554 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 THTPAQ9BU02 230 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 TUBGCP6Q96RT7 1819 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 SRRM3A6NNA2 597 aaPredicted RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 RARGP13631 454 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 KNOP1Q1ED39 458 aaKnown RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 KHDC1Q4VXA5 237 aaKnown RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 DAB2IPQ5VWQ8 1189 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 C3P01024 1663 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 H3BRJ5 948 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 TPP2P29144 1249 aaPredicted RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 DYNC1I2Q13409 638 aaKnown RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 PSMD6Q15008 389 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 DUPD1Q68J44 220 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 RBBP8NLQ8NC74 664 aaPredicted RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
SBSPON-201ENST00000297354 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 HEY2Q9UBP5 337 aa17.82■□□□□ 0.44
SBSPON-201ENST00000297354 IGSF9BQ9UPX0 1349 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 FESP07332 822 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 HSPA1LP34931 641 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 SOX5P35711 763 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 IZUMO2Q6UXV1 221 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 RGS9BPQ6ZS82 235 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 PALB2Q86YC2 1186 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 NUP85Q9BW27 656 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 CARD9Q9H257 536 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 PAEPP09466 180 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 COILP38432 576 aaPredicted RBP17.81■□□□□ 0.44
SBSPON-201ENST00000297354 ATXN3P54252 364 aaPredicted RBP17.81■□□□□ 0.44
SBSPON-201ENST00000297354 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 IRF2BP2Q7Z5L9 587 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 CENPTQ96BT3 561 aa17.81■□□□□ 0.44
SBSPON-201ENST00000297354 RIOK1Q9BRS2 568 aaKnown RBP17.81■□□□□ 0.44
SBSPON-201ENST00000297354 CENPKQ9BS16 269 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms