RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 USP40Q9NVE5 1235 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 TAS2R14Q9NYV8 317 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 PRKAG3Q9UGI9 489 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 ACTL7BQ9Y614 415 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 FTLP02792 175 aaPredicted RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 ITIH2P19823 946 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 GBP2P32456 591 aaPredicted RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 CLNS1AP54105 237 aaKnown RBP20.6■□□□□ 0.89
TRA2A-201ENST00000297071 COPS2P61201 443 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 PICALMQ13492 652 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 ACVR2BQ13705 512 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 E2F5Q15329 346 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 PHLDB3Q6NSJ2 640 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 UVRAGQ9P2Y5 699 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
TRA2A-201ENST00000297071 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
TRA2A-201ENST00000297071 LIN7AO14910 233 aaPredicted RBP20.59■□□□□ 0.89
TRA2A-201ENST00000297071 UBOX5O94941 541 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 CYP1A2P05177 515 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 NMT1P30419 496 aaKnown RBP20.59■□□□□ 0.89
TRA2A-201ENST00000297071 SNRPFP62306 86 aaKnown RBP20.59■□□□□ 0.89
TRA2A-201ENST00000297071 CALCOCO2Q13137 446 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 RNF43Q68DV7 783 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 INTS8Q75QN2 995 aaKnown RBP20.59■□□□□ 0.89
TRA2A-201ENST00000297071 ZDHHC14Q8IZN3 488 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 KRT35Q92764 455 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 RXFP1Q9HBX9 757 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 ABCF3Q9NUQ8 709 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 LGALS13Q9UHV8 139 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
TRA2A-201ENST00000297071 IGLV3-22A0A075B6J6 115 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 FSCN2O14926 492 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 COMTP21964 271 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 NACC1Q96RE7 527 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
TRA2A-201ENST00000297071 EML1O00423 815 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ECEL1O95672 775 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 COPB2P35606 906 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 EPC2Q52LR7 807 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 PRR5LQ6MZQ0 368 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ASRGL1Q7L266 308 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 OTOP1Q7RTM1 612 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 RELL1Q8IUW5 271 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 FAM178BQ8IXR5 827 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 TCP11Q8WWU5 503 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 SLC5A5Q92911 643 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ECT2Q9H8V3 914 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 AGAP1Q9UPQ3 857 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
TRA2A-201ENST00000297071 PSMD10O75832 226 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 SLITRK3O94933 977 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ADRA2BP18089 450 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 PDE6BP35913 854 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
TRA2A-201ENST00000297071 VSTM1Q6UX27 236 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 CEP128Q6ZU80 1094 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ADAT2Q7Z6V5 191 aaKnown RBP20.57■□□□□ 0.88
TRA2A-201ENST00000297071 TBC1D1Q86TI0 1168 aaPredicted RBP20.57■□□□□ 0.88
TRA2A-201ENST00000297071 PALB2Q86YC2 1186 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 CCDC105Q8IYK2 499 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 ARHGEF2Q92974 986 aaKnown RBP20.57■□□□□ 0.88
TRA2A-201ENST00000297071 CNKSR1Q969H4 720 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 POLLQ9UGP5 575 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 GTF3C4Q9UKN8 822 aa20.57■□□□□ 0.88
TRA2A-201ENST00000297071 UBR3Q6ZT12 1888 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 ATP5HO75947 161 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 CLTAP09496 248 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 CCNB1P14635 433 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 RWDD2BP57060 319 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 SPATA21Q7Z572 469 aa20.56■□□□□ 0.88
TRA2A-201ENST00000297071 CDC42EP4Q9H3Q1 356 aaKnown RBP20.56■□□□□ 0.88
TRA2A-201ENST00000297071 MPHOSPH10O00566 681 aaKnown RBP20.55■□□□□ 0.88
TRA2A-201ENST00000297071 ANP32DO95626 131 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 PYGMP11217 842 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 EEF2P13639 858 aaKnown RBP20.55■□□□□ 0.88
TRA2A-201ENST00000297071 FGFR4P22455 802 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 PRELPP51888 382 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 CYP4A11Q02928 519 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 MKRN4PQ13434 485 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-201ENST00000297071 PTK6Q13882 451 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 ARHGAP44Q17R89 818 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 RPUSD2Q8IZ73 545 aaKnown RBP20.55■□□□□ 0.88
TRA2A-201ENST00000297071 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-201ENST00000297071 GRK7Q8WTQ7 553 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 DYDC1Q8WWB3 177 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 MAGEB18Q96M61 343 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 MRIQ9BWK5 157 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 FOXP3Q9BZS1 431 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 TRIM7Q9C029 511 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 TMEM206Q9H813 350 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 ADGRA3Q8IWK6 1321 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 TTC4O95801 387 aa20.55■□□□□ 0.88
TRA2A-201ENST00000297071 ALDH5A1P51649 535 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms