RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 GTSE1Q9NYZ3 720 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 CSADQ9Y600 493 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 IGF2BP3O00425 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ZFXP17010 805 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 GALCP54803 685 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 FAM98CQ17RN3 349 aaKnown RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 JAMLQ86YT9 394 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 SYN2Q92777 582 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ARHGAP26Q9UNA1 814 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 MROH7-TTC4A0A0A0MT08 1334 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 TMEM120BA0PK00 339 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ZNF18P17022 549 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 NEK2P51955 445 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ROR1Q01973 937 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 LONRF1Q17RB8 773 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ERP44Q9BS26 406 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 STX18Q9P2W9 335 aaKnown RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 MTO1Q9Y2Z2 717 aaKnown RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ZNF609O15014 1411 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ACADSP16219 412 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PASD1Q8IV76 773 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 KCNK16Q96T55 309 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 KLHL8Q9P2G9 620 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PSMC3IPQ9P2W1 217 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 SLC12A6Q9UHW9 1150 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 DBR1Q9UK59 544 aaKnown RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 UBE4BO95155 1302 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ITIH4Q14624 930 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 RFX8Q6ZV50 586 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 THAP11Q96EK4 314 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 CD248Q9HCU0 757 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 HEY1Q9Y5J3 304 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ABL1P00519 1130 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ENO1P06733 434 aaKnown RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PRLRP16471 622 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PMLP29590 882 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 USP11P51784 963 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 KDSRQ06136 332 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 CDKL3Q8IVW4 592 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 RYBPQ8N488 228 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ERGIC2Q96RQ1 377 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 UCHL3P15374 230 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 GNA15P30679 374 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 VHLP40337 213 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PRKG1Q13976 671 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 CYLC2Q14093 348 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 COL23A1Q86Y22 540 aaPredicted RBP11.69□□□□□ -0.54
PBRM1-201ENST00000296302 MTBPQ96DY7 904 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ZC4H2Q9NQZ6 224 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PARVAQ9NVD7 372 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
PBRM1-201ENST00000296302 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SLC26A4O43511 780 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 NMT2O60551 498 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 IL10P22301 178 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 KCNA4P22459 653 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SH3RF3Q8TEJ3 882 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SUCLA2Q9P2R7 463 aaPredicted RBP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SERPINB2P05120 415 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TYK2P29597 1187 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 HSD17B3P37058 310 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
PBRM1-201ENST00000296302 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 POTEAQ6S8J7 498 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 KIF2BQ8N4N8 673 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 CCNYL1Q8N7R7 359 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 ATP6V0A4Q9HBG4 840 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 POLD4Q9HCU8 107 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
PBRM1-201ENST00000296302 TBC1D22BQ9NU19 505 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms