RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 FAM187BQ17R55 369 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 HSP90AA4PQ58FG1 418 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ATF7IP2Q5U623 682 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 TTI2Q6NXR4 508 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ZNF710Q8N1W2 664 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 AOPEPQ8N6M6 819 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 KCNN1Q92952 543 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 CBX8Q9HC52 389 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 TYW1Q9NV66 732 aaKnown RBP16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ANKFY1Q9P2R3 1169 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 RWDD2AQ9UIY3 292 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 PADI3Q9ULW8 664 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 EXOC7Q9UPT5 735 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 SFPQP23246 707 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
CCDC140-201ENST00000295226 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
CCDC140-201ENST00000295226 LUZP1Q86V48 1076 aa16.58■□□□□ 0.24
CCDC140-201ENST00000295226 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
CCDC140-201ENST00000295226 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 NOC3LQ8WTT2 800 aaKnown RBP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
CCDC140-201ENST00000295226 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
CCDC140-201ENST00000295226 GOLGA8IPA6NC78 632 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 GOLGA8JA6NMD2 632 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 PDXKO00764 312 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 KIAA0355O15063 1070 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 PIGRP01833 764 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 CYP2J2P51589 502 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 PAK2Q13177 524 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 IQCB1Q15051 598 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 SEZ6Q53EL9 994 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TSHZ1Q6ZSZ6 1077 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 NAT10Q9H0A0 1025 aaKnown RBP16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 PDZD7Q9H5P4 517 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 AGPAT5Q9NUQ2 364 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
CCDC140-201ENST00000295226 TULP1O00294 542 aaPredicted RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 CALUO43852 315 aaPredicted RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 MGEA5O60502 916 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 TIMP1P01033 207 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 NR3C1P04150 777 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 RAG1P15918 1043 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 SYN1P17600 705 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 IBSPP21815 317 aaPredicted RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 PPP1R2P41236 205 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 NCAPHQ15003 741 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ARMCX5Q6P1M9 558 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 HS2ST1Q7LGA3 356 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 POMGNT1Q8WZA1 660 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 SAAL1Q96ER3 474 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 PRIMPOLQ96LW4 560 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 TSG101Q99816 390 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 SRRTQ9BXP5 876 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 EIF2AQ9BY44 585 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 PTPRHQ9HD43 1115 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 A0A1B0GUA9 196 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ABLIM1O14639 778 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 GPR182O15218 404 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 TOM1L1O75674 476 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 SCP2P22307 547 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ABCD1P33897 745 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 CASP4P49662 377 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 CSGALNACT2Q8N6G5 542 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 RDH13Q8NBN7 331 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 FAM200AQ8TCP9 573 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 DPF3Q92784 378 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 SAMSN1Q9NSI8 373 aaKnown RBP16.56■□□□□ 0.24
CCDC140-201ENST00000295226 FANCLQ9NW38 375 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 NFE2L3Q9Y4A8 694 aa16.56■□□□□ 0.24
CCDC140-201ENST00000295226 BICDL2A1A5D9 508 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 CLDN3O15551 220 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 EVI5O60447 810 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 NPTXRO95502 500 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 PROZP22891 400 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 NR2F2P24468 414 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 OSTNP61366 133 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 LRRC63Q05C16 580 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
CCDC140-201ENST00000295226 ADAM9Q13443 819 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 TPD52L1Q16890 204 aaPredicted RBP16.55■□□□□ 0.24
CCDC140-201ENST00000295226 ZNF568Q3ZCX4 644 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms