RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ADAM7Q9H2U9 754 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 CDC42EP4Q9H3Q1 356 aaKnown RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 NHSL1Q5SYE7 1610 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 NCANO14594 1321 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 CYP26A1O43174 497 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 ATP11AP98196 1134 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 CYP4F22Q6NT55 531 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 CROCCP2Q86T23 111 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 EXOC3L1Q86VI1 746 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 KIAA0825Q8IV33 1275 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 ARHGEF19Q8IW93 802 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 SEC14L1Q92503 715 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 PWWP2AQ96N64 755 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 KLHL14Q9P2G3 628 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 GCKP35557 465 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 KRT17Q04695 432 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 VSIG1Q86XK7 387 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 TGS1Q96RS0 853 aaKnown RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 HEMGNQ9BXL5 484 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 NOP53Q9NZM5 478 aaKnown RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 MYH7BA7E2Y1 1941 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 SGPL1O95470 568 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 RARAP10276 462 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 KRT5P13647 590 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 SPIRE1Q08AE8 756 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 PIGWQ7Z7B1 504 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 ZNF564Q8TBZ8 553 aaPredicted RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 FAM20AQ96MK3 541 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCNF-201ENST00000293968 IRS2Q9Y4H2 1338 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 CFAP73A6NFT4 308 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 SNX3O60493 162 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 BFSP1Q12934 665 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 CLUL1Q15846 466 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 HP1BP3Q5SSJ5 553 aaPredicted RBP15.79■□□□□ 0.12
CCNF-201ENST00000293968 SPATA21Q7Z572 469 aa15.79■□□□□ 0.12
CCNF-201ENST00000293968 GTPBP10A4D1E9 387 aaKnown RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 F5H6K3 240 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 GH1P01241 217 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 HSPA6P17066 643 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 PTGIRP43119 386 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 GABPAQ06546 454 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 INTS8Q75QN2 995 aaKnown RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 DOT1LQ8TEK3 1739 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 TTC7AQ9ULT0 858 aaPredicted RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 SCN7AQ01118 1682 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 C21orf2O43822 256 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 RARGP13631 454 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 PRR5LQ6MZQ0 368 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 GSTA5Q7RTV2 222 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 SLC13A5Q86YT5 568 aaPredicted RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 TXLNGYQ9BZA5 131 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 LAMB1P07942 1786 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
CCNF-201ENST00000293968 CDC42EP5Q6NZY7 148 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 SPDL1Q96EA4 605 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 SLC12A4Q9UP95 1085 aa15.78■□□□□ 0.12
CCNF-201ENST00000293968 PFASO15067 1338 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 CALCAP01258 141 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 IL1R1P14778 569 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 NCALDP61601 193 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 GSTA1P08263 222 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 GBP1P32455 592 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 RWDD2BP57060 319 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 COPS2P61201 443 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 TMED2Q15363 201 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 EPC2Q52LR7 807 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 C2CD6Q53TS8 623 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 ETNK1Q9HBU6 452 aa15.77■□□□□ 0.12
CCNF-201ENST00000293968 TOM1O60784 492 aa15.77■□□□□ 0.11
CCNF-201ENST00000293968 FOSP01100 380 aaPredicted RBP15.77■□□□□ 0.11
CCNF-201ENST00000293968 SYDE2Q5VT97 1194 aa15.77■□□□□ 0.11
CCNF-201ENST00000293968 TEKT1Q969V4 418 aa15.77■□□□□ 0.11
CCNF-201ENST00000293968 C9orf72Q96LT7 481 aa15.77■□□□□ 0.11
CCNF-201ENST00000293968 TRIM7Q9C029 511 aa15.77■□□□□ 0.11
CCNF-201ENST00000293968 SPAG7O75391 227 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 KRT16P08779 473 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ATP5DP30049 168 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CHKAP35790 457 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ZNF720Q7Z2F6 126 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 FMNL3Q8IVF7 1028 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 C15orf41Q9Y2V0 281 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CCDC88AQ3V6T2 1871 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 IGKV6D-41A0A0C4DH26 115 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ATF2P15336 505 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CRYMQ14894 314 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CNOT7Q9UIV1 285 aaKnown RBP15.76■□□□□ 0.11
CCNF-201ENST00000293968 ANAPC5Q9UJX4 755 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 USTQ9Y2C2 406 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 PCDHAC2Q9Y5I4 1007 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms