RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 GSTA1P08263 222 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 GSTA2P09210 222 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 ARHGEF16Q5VV41 709 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 CCDC127Q96BQ5 260 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 IL25Q9H293 177 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SCINQ9Y6U3 715 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 H7C0C1 242 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 ATP5OP48047 213 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 JAG1P78504 1218 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 LRRC63Q05C16 580 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 STOX1Q6ZVD7 989 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SPDL1Q96EA4 605 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 STOML1Q9UBI4 398 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 KIAA1024Q9UPX6 916 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 EXOC1LA0A1B0GW35 172 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 GRK4P32298 578 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 KAZNQ674X7 775 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 MAF1Q9H063 256 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
SYNGAP1-201ENST00000293748 PODXLO00592 558 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 CA4P22748 312 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 PDCD2Q16342 344 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ODR4Q5SWX8 454 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 CXorf38Q8TB03 319 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 PPWD1Q96BP3 646 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ELAC2Q9BQ52 826 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 SGK1O00141 431 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 COBLO75128 1261 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 TNNC2P02585 160 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 FLT3LGP49771 235 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 KRT80Q6KB66 452 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ABRAQ8N0Z2 381 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 PAGE5Q96GU1 130 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 FOXP2O15409 715 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 KIF1CO43896 1103 aaKnown RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 MMEP08473 750 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 FAM133AQ8N9E0 248 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 PIGSQ96S52 555 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 PTPREP23469 700 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 STX1BP61266 288 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 SEC23AQ15436 765 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZBTB8OSQ8IWT0 167 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 AP5M1Q9H0R1 490 aa12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-201ENST00000293748 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 HMGCRP04035 888 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 CUL4BQ13620 913 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 TMCO4Q5TGY1 634 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 ALKBH5Q6P6C2 394 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 MRPL47Q9HD33 250 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 MAP3K20Q9NYL2 800 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 CCDC85CA6NKD9 419 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 APOEP02649 317 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 DLATP10515 647 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 NR5A1Q13285 461 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 RBPJLQ9UBG7 517 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 MID2Q9UJV3 735 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 MSCO60682 206 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 TADA3O75528 432 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 GGCXP38435 758 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 YARSP54577 528 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 ABTB1Q969K4 478 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 FAM170AA1A519 330 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 KCNJ6P48051 423 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
SYNGAP1-201ENST00000293748 CFAP73A6NFT4 308 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 PFDN6O15212 129 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ADORA2AP29274 412 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms